<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23062

Description U-box domain-containing protein 52-like
SequenceMSRMNSEKKLGAGRVVAVAIENNKTSQHAAKWAVDNLLPKDQCLLLIHVRPKSSSANSANEAVGDNESKELFESFRVFCNRKSIQCREVLLEDMDISKALLENISVNSIEFLVLGAPSRGGIVRRFRTTDVPSSVSKGAPPFCTVYIISKGKISSVRSATAPLAPKPAAARNQLQPQQPQPLQPQPRYQPLMRNPEGLLESHQTRNYPPRPSQGSGTHKMVLDDDDIISPFTRAGKSYESSKLPDSDISFVSSGRPSIDRIFPTMYDDLDTASGRLSGVSDSDTRSFASSLSSQGIDDFSFSSQSRLSDCTDDVEFEMRRLKQELKQTMDMYSSACKEAMTAKQRAMELQRWKAEEQKRSEDSETVDASAIQFMEMEQDRIRAEALEKIAALEAQKRMTQVERRRPSESFGHGPAMYRRYTIEEIEEATNMFSDSLKIGEGGYGPVYRSELDCTQVAIKVLKPDAAQGREQFQQEVEVLSRIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGSSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTARPPMGLTHHVSRSIENGTFPEMLDPAVEDWPVEHALHFAKLSLGCAEMRRKDRPDLGKVVLPELNKLRAFAEDSMSPMMMFGLRTGGSGGGGGGYIPRNSNPSSSTHSDTSNLSGFSGYESRSSSSSQGRL
Length763
PositionTail
OrganismVigna radiata var. radiata (Mung bean) (Phaseolus aureus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.07
Grand average of hydropathy-0.479
Instability index57.99
Isoelectric point6.55
Molecular weight84635.93
Publications
PubMed=25384727

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23062
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      96.25|      27|      28|     301|     327|       1
---------------------------------------------------------------------------
  275-  294 (17.32/ 6.60)	.....RLSGVSDS...DTRSFASSLsSQ
  301-  327 (45.82/29.16)	FSSQSRLSDCTDDVEFEMRRLKQEL.KQ
  332-  355 (33.11/19.10)	YSSACKEAMTAKQRAMELQRWKAE....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.89|      29|     110|     509|     539|       2
---------------------------------------------------------------------------
  509-  539 (46.09/39.31)	SLDDCLFRRGSSRPPLpwQLRFQIAAEIATG
  621-  649 (50.79/33.96)	SLGIMLLQLVTARPPM..GLTHHVSRSIENG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.40|      11|      29|     407|     418|       5
---------------------------------------------------------------------------
  407-  418 (20.19/17.58)	SESF.....GHGPaMYR
  433-  448 (17.21/ 8.94)	SDSLkigegGYGP.VYR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.22|      21|      22|     359|     380|       6
---------------------------------------------------------------------------
  359-  380 (31.07/26.56)	RSEDSETVDASAIQfMEMEQ.DR
  382-  403 (29.16/18.85)	RAEALEKIAALEAQ.KRMTQvER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.64|      22|     357|     185|     213|       7
---------------------------------------------------------------------------
  162-  183 (40.44/23.90)	PLAPKPAA..ARNQLQPQQPQPLQ
  190-  213 (38.20/19.50)	PLMRNPEGllESHQTRNYPPRPSQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23062 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ATAPLAPKPAAARNQLQPQQPQPLQPQPRYQPLMRNPEGLLESHQTRNYPPRPSQGSGTHKMVLDDDD
2) GGGGGGYIPRNSNPSSSTHSDTSNLSGFSGYESRSSSSSQGRL
159
721
226
763










Molecular Recognition Features






MoRF SequenceStartStop




1) DRIFPTMY
259
266