<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23060

Description U-box domain-containing protein 52-like isoform X2
SequenceMCQGNNVQLKEAVIHDSDIVRGIVEYAQRNRVNTIVVGAGSSNKTSFARSLYLRSGSKKLKGHVSTGVMKSAPDHSSVFVISKGKIVGARPAIRPMVNMVQPPSEHAKSENRTHGIRSGSTNGRSERSLVLEMARSSSVGQSTEHRLIFCHSSDGTDSSKSNKLVSSDGIRQECDLSDSQFTEEMESEMKRLKLKLKQTMDMLSSACKEAVSAESKAKEINQRKLDEERIAEVAKLSKEAALALAEKEKVKAKAALEAAEEAIKMVEKEAQRRFNAEMKARREAHEKDRALNQLACREIRCRKYSISDVEEATHKFSPALKVGEGGYGPVFKGQLDHTQVAIKILNPEATHGRRQFQQEVEVLCSIRHPNMVLLIGACPEYGCLVYEYLENGSLEDRLLRKNDSPPIPWWKRFEIAAEIATALLFLHQTKPEPIVHRDLKPANILLDRNFVSKISDVGLSRLVPASVADSVTQYHLTAAAGTFCYIDPEYQQTGMLTTKSDVYSLGIMLLQIITAKAPMGLAHHVLKAIEEGTFSEMLDPSINDWPLEETLEFAKLSLKCAELSKKDRPDLATVVVPKLNQLREFGLASHNKLNHSHPQLPLSPTRTHLSDP
Length612
PositionTail
OrganismVigna radiata var. radiata (Mung bean) (Phaseolus aureus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.05
Grand average of hydropathy-0.418
Instability index42.10
Isoelectric point8.66
Molecular weight67958.03
Publications
PubMed=25384727

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23060
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     132.36|      49|      49|     213|     261|       1
---------------------------------------------------------------------------
  213-  248 (44.90/32.27)	.............AESKAKEINQRKLDEER.....IAEVAKLSKE..AA.LALAEKE
  249-  269 (25.09/14.32)	KVKAKAALEAAEE....................................aIKMVEKE
  271-  324 (62.38/48.11)	QRRFNAEMKARREAHEKDRALNQLACREIRcrkysISDVEEATHKfsPA.LKVGE..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.75|      22|     333|     149|     170|       2
---------------------------------------------------------------------------
  117-  139 (25.79/15.53)	RSGSTNGrSERSLVLEMARSSSV
  149-  170 (36.96/25.64)	FCHSSDG.TDSSKSNKLVSSDGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.39|      48|      49|     440|     488|       3
---------------------------------------------------------------------------
  440-  488 (75.57/52.32)	KPANILLDRNFVSKISdVGLSRLVPASVADSVTQYHLTA.AAGTFC.YIDP
  491-  540 (71.81/45.01)	QQTGMLTTKSDVYSLG.IMLLQIITAKAPMGLAHHVLKAiEEGTFSeMLDP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23060 with Med32 domain of Kingdom Viridiplantae
Unable to open file!