<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23056

Description U-box domain-containing protein 52-like
SequenceMWLQKHNCDKKDGVRGIVAVGIDSDKGSQNALKWTIDHLLPKGSNVVLIHVKTKPSSLHPSVSLGNPRANGIAEHALVCKDPDEHTKEVFHPYRVFCARKDIHCKDVVIEDVDVAKALIEYASQYAIEHLVIGTSNKGGFLRRFKIADIPGTVSKGAPDFCTVYVVTKGKIQSMRSASRAAPTFSPLQNQLSHHSSRLDLPEPRVVRGLERRSLDVPRRMAHDDPEPFRSPFTRRGGTNEKYGDIPGPETDISFVSSRRSSTDRSFPLYNNSNHYPESNPRLSYSSDIDGSNYSFESIPFGRRSMDICSDFSSFSQESDGLSSSASQGMDDVEAEMRRLKLELKQTMEMYSNACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKARSKAAIETAEAQKRIAELESQKRINAEMKALMETEEKRKAVDALSGTGLRYRRYTIEEIEAATHFFTESQKIGEGGYGPVYKCLLDHTPVAVKVLSPDAAQGRSQFQREVEVLSCIRHPNMVLLIGACPEYGCLVYEYMANGSLDDCLFCRGNRPPIPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKPPMGLTHNVQRAIEKGTFIDMLDPKVPDWPTEDALVFAKIAVRCAELRRRDRPDLGKEVLPELNRLRELAESHDHYSMFSGYASPSNQSQVSLDEASSSLPHSGESS
Length770
PositionTail
OrganismVigna radiata var. radiata (Mung bean) (Phaseolus aureus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.07
Grand average of hydropathy-0.462
Instability index53.73
Isoelectric point6.64
Molecular weight86018.63
Publications
PubMed=25384727

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23056
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     198.48|      60|      88|       8|      67|       1
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    8-   67 (104.20/73.41)	CDKKD.GVRGIVAVGIDSDKG.SQNALKWTIDHLLPKGSNVVLIHVKTKPSSLHPSVSLGNP
   97-  158 (94.28/65.71)	CARKDiHCKDVVIEDVDVAKAlIEYASQYAIEHLVIGTSNKGGFLRRFKIADIPGTVSKGAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     221.01|      73|      88|     569|     652|       2
---------------------------------------------------------------------------
  575-  652 (113.07/98.96)	QTKPePL.....VHRDLKPANI..LLDrnyvAKISDVGLA.RLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSL
  661-  741 (107.95/67.40)	TAKP.PMglthnVQRAIEKGTFidMLD....PKVPDWPTEdALVFAKIAVRCAELRRRDRPDLGKEVLPELNRLRELAESHDHYSM
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     118.24|      20|      20|     278|     297|       3
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  217-  230 (19.98/ 9.08)	..PRRMAHDD.....P..E......PFRS
  238-  256 (22.51/11.23)	TNEK..Y.GD.....I..PGpeTDISFVS
  257-  277 (17.03/ 6.58)	S..RRS.STDrsfplY..NN..SNHYPE.
  278-  297 (38.10/24.45)	SNPRLSYSSD.....I..DG..SNYSFES
  299-  318 (20.62/ 9.63)	..PFGRRSMD.....IcsDF..SSFSQES
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     125.62|      34|      48|     360|     407|       4
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  329-  354 (43.85/26.54)	MDDVEA.....EMRRLKLELKQTME.................MYSNAC
  355-  402 (42.91/49.95)	KEALTAQQKAVELQRWKLEEERRLEearlaeeaalaiaeKEKARSKAA
  403-  428 (38.85/22.73)	IETAEAQKRIAELESQK......................RINAEMKAL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23056 with Med32 domain of Kingdom Viridiplantae
Unable to open file!