<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23043
Description |
mediator of RNA polymerase II transcription subunit 33A-like |
Sequence | MAVPAQTSEADAWDAVLRQTKLAVESNTDPYAWAFDIRSTLHSSAIAIPSTELAHRLVSHFFWDNYSAAAWKLLHTSLSLDIIPPSLLLALLSAAVVPRRKLYPTAYRLYMELLKQLRDMLEHDVSSPNYEKIMKSIDDALQLSQVYGQKLWEPGIVLVEFVFSVVWQLLEASLHDEGLLDHTTENKPIWLCRSHDMDIDGHDIVGEKKTEDVEGFQKKNTAMAVEIIAEFLQHKMTSRILSLVHWNMPSYWKSFVHQTQLLVSNSPILRNLRNNTVDSLMSLTENIHAVVSHEFKIKSKVKTKEVICGGSPMSFAAQSSGDSWSALWLPIDLILEDALDGGQVAAFSAIEIITGLVKTLHVVNGTMWHSTFLGLWVAALRLVQRVGTVPTKRERDSKEGPIPRLDTCMCMLLSITTLVVTCIIEEEEGQLIEEAEHSPTTSKGTEKPALGKCRGELITSLQLLGDYESLLTPPQPVLEEANKAAAKAILFLSGNPVGSGYMEYTNGLPIKYSGNLRHLIVEACIARNLLDASAYLWPGYVSECSNQIPCSISNHVPGWSSLMEGSQLTPELVNVLVATPACSLAEIEKIYEIAINGSDEDKISAATIMCGASLGRGWNVQELTLLFITKLLSPIDPPNYSGAESHLISQAAFLNVLLLGISSVDCVHVFSLHGLVPLLAAGLMLISEVFGSRVPDASGTVAAGEKLTHWEVFSNAFTLLLRFWRFDRLPVEQVRSGATAPPFGSLLSPECLLLVRNSKLASLGRTAKDQKMLKRWSNILSFPADPIFIDFFPKLNYWYRKHQDSIASTRSGLVPGGPVHRIVDALLSMMFSKVSNGAEPSTPTTSGNNSSSGLAFDDALKVPAWDILEAIPFVLDASLTSCAYGKLSTRDLATGLKDLADFLPASLVTIASYFSAEVTRGVWKPALMNGTDWPSPASNLSLVQQEIKNILVDFNVPSLDIDGKSPPTLPLPLAAFVSLTITYKLDKATERFLALIAPTVTALASACPWPSLPIVTSLWVQKVKRWSNYFVLSASSTVFHHNRDSVVQLLKSCFTSTLGLGSACIYNNGGVGALLGHGLVPQISDGISPVAPGILYLRVYRSIGDIELLIEEIVPILMLSVRDIASDLSKGIIRKPKKTKFGIKYGQVSLARSMARVEHAALLGASLVWISGGPKFVQYLISETLPYWFLSASMLEQGGGESGVMVAMLKGYALAFFVFLSIAFSWGIDNSHQPKRLTKVIGLHMEFLESALNRATSMRCHGATWEAYVSWFVSLMVSRAPSWIQEADEDLLKRLSRGLRRMDEHELALRLLEIGGIRVMGAAAEMIIEFKRI |
Length | 1333 |
Position | Tail |
Organism | Vigna radiata var. radiata (Mung bean) (Phaseolus aureus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.159 |
Instability index | 42.29 |
Isoelectric point | 6.11 |
Molecular weight | 146392.70 |
Publications | PubMed=25384727
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP23043
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 318.46| 98| 247| 718| 843| 1
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725- 843 (157.16/142.26) RFDRLPVEQVRSGATAPPFGSLLSPECLLLvrnsklaslgrtakdQKmLKRWSNILSFPADP.IFIDFFPKLNYWYRKHQDSIASTRSGLV..PGGpvhriVDALLSM.MFSKVSNGAEPSTP
991- 1092 (161.30/93.01) RFLALIAPTVTALASACPWPSLPIVTSLWV...............QK.VKRWSNYFVLSASStVFHHNRDSVVQLLKSCFTSTLGLGSACIynNGG.....VGALLGHgLVPQISDGISPVAP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 89.62| 29| 93| 597| 627| 2
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597- 627 (43.50/34.45) GSDEDKISaATIMCGASLGRgWNV..QELTLLF
691- 721 (46.12/27.08) GSRVPDAS.GTVAAGEKLTH.WEVfsNAFTLLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 129.32| 42| 234| 13| 62| 7
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13- 62 (58.71/63.34) WDAVLRQTKLAVeSNTdPyawafdIRSTLHSSAIA..IPSTELAHRLVSHFF
252- 295 (70.60/47.22) WKSFVHQTQLLV.SNS.P......ILRNLRNNTVDslMSLTENIHAVVSHEF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 144.19| 47| 99| 1118| 1169| 16
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1118- 1169 (74.31/47.21) MLSVrdiasDLSKGI..IRKPKK.TK.FG..IKYGQVSLARSMARVEHAALLGASLVW
1219- 1271 (69.88/35.72) FLSI.....AFSWGIdnSHQPKRlTKvIGlhMEFLESALNRATSMRCHGATWEAYVSW
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