<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23040
Description |
mediator of RNA polymerase II transcription subunit 33A isoform X6 |
Sequence | MESALEWNDEVREGVLKRLKLWQQCSKKPAAALVTELVEHLNTLGIALPSPELGELLVSQICFDNNHPWMWKFTHHALSSRLLFPLQILSLLASNAIPHRHSHPHSFALFLPLLSQYAFSFQSTPSLSCNRKIVSSVDSALRISETYKVRDLEIGHVFVLFFYEIVISLLDCVLIDWGFQVTFSEKSSLVAAGKGEDCMDIDRNVTQNFEKSEYREQIRKRNSFTALEVLERLTESRKATILLQSVLLNMPEKFNCLQQRLQFLESLELASSELKLVNQVLTKVSANMRGVSHFDYSLSKHRLVGTLINMGSCKIPLKCNYRFCQSPCWVPFDIYMENAMDSRQIPTKSAIDVLTEGIKTLQMLNQASWQETFLALWLSALRLVQRERDPPEGPIPHLVARLCVLLCIVPLAIANVLRDASEHNLSSVQVSMESEYTHEMKSDDSVKRELMSSVQVLGHFSGLLCPPTLVIDAANQAARKAASFIYNSMNGKGESGTGIHANANTKAGGNLRHLIVEACIARNLMDTSVYFWPGYVSTSVLSLSDSSPPEKSPWSMFMEGTPLNNTLINSLTMTPASSLAEIEKLYYIALNGSDVERPAAAKILCGASLGHGWYIQEHVIHHVIKLLASPLPPSHAGSRSLLVDNMPMLCAVLRGASSVDTVHILSLHGVVPTVAAALLPLCEAFGSIKPTSNSTGDESSTTYMAFSLAFLFLIRLWKFCRPPLDLCITELGVAVGGLEYILSLHNHRVMYSQDKRKSNPNLPESASVKPVYIDSFPKLRALYCQYKSCVASALSGISTGNSIHQTANMILSMIYQKITKVGISSSNSSSPTSSNACSSLINSGEDAFQRPMLPGWEVLEALPFVLESILTACAHGRISSRELTTGLRDLVDFLPASLAAIIDYFSSEVTRGVWKLVPMNGTDWPSPAALLPSIELEINAILTHVGVEVPNCSSGMEDATSKLKWRIKEPND |
Length | 972 |
Position | Tail |
Organism | Vigna radiata var. radiata (Mung bean) (Phaseolus aureus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.058 |
Instability index | 42.48 |
Isoelectric point | 6.43 |
Molecular weight | 107398.73 |
Publications | PubMed=25384727
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Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP23040
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.47| 19| 25| 796| 814| 1
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796- 814 (34.84/19.50) GISTGNSIHQT.ANMILSMI
822- 841 (29.63/15.55) GISSSNSSSPTsSNACSSLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 229.68| 68| 77| 298| 368| 2
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298- 368 (113.65/90.52) LSKHRLVGTLINMGSCKIPlKCNYRFCQSPCWVPFDIymENAMDSRQIPTKSAIDVLTEGIKTLQMLNQAS
378- 445 (116.02/80.43) LSALRLVQRERDPPEGPIP.HLVARLCVLLCIVPLAI..ANVLRDASEHNLSSVQVSMESEYTHEMKSDDS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.92| 16| 29| 740| 755| 3
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740- 755 (30.54/23.12) YILSLHNHRVMYSQDK
772- 787 (31.38/23.99) YIDSFPKLRALYCQYK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.69| 15| 25| 171| 185| 4
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171- 185 (29.45/18.01) DCVLIDWGFQVTF..SE
197- 213 (23.24/12.85) DCMDIDRNVTQNFekSE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 223.60| 63| 349| 515| 583| 6
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446- 509 (77.95/40.47) VKRELM.SSVQvlgHFSGLLCPPTLVIDAANQAARKAASFIynsMNGKGESGTGIHANANTKAGG.....
520- 583 (106.35/73.80) IARNLMdTSVY...FWPGYVSTSVLSLSDSSPPEKSPWSMF...MEGTPLNNTLINSLTMTPASSLAEIE
906- 935 (39.29/17.22) .............................SSEVTRGVWKLV.......PMNGTDWPS....PAALLPSIE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 93.20| 28| 31| 47| 76| 7
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47- 76 (49.15/39.40) ALPSPELGELLVSQICFDNNHPwmWKFTH.H
77- 105 (44.05/26.83) ALSSRLLFPLQILSLLASNAIP..HRHSHpH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.73| 21| 31| 227| 247| 8
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227- 247 (31.19/21.60) LEVLERLTESRKATILLQSVL
261- 281 (31.54/21.93) LQFLESLELASSELKLVNQVL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.45| 17| 692| 19| 37| 9
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19- 37 (26.94/18.87) LKLWQQCskKPAAAL.VTEL
714- 731 (29.51/14.92) IRLWKFC..RPPLDLcITEL
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