<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23039
Description |
mediator of RNA polymerase II transcription subunit 33A isoform X2 |
Sequence | MDIDRNVTQNFEKSEYREQIRKRNSFTALEVLERLTESRKATILLQSVLLNMPEKFNCLQQRLQFLESLELASSELKLVNQVLTKVSANMRGVSHFDYSLSKHRLVGTLINMGSCKIPLKCNYRFCQSPCWVPFDIYMENAMDSRQIPTKSAIDVLTEGIKTLQMLNQASWQETFLALWLSALRLVQRERDPPEGPIPHLVARLCVLLCIVPLAIANVLRDASEHNLSSVQVSMESEYTHEMKSDDSVKRELMSSVQVLGHFSGLLCPPTLVIDAANQAARKAASFIYNSMNGKGESGTGIHANANTKAGGNLRHLIVEACIARNLMDTSVYFWPGYVSTSVLSLSDSSPPEKSPWSMFMEGTPLNNTLINSLTMTPASSLAEIEKLYYIALNGSDVERPAAAKILCGASLGHGWYIQEHVIHHVIKLLASPLPPSHAGSRSLLVDNMPMLCAVLRGASSVDTVHILSLHGVVPTVAAALLPLCEAFGSIKPTSNSTGDESSTTYMAFSLAFLFLIRLWKFCRPPLDLCITELGVAVGGLEYILSLHNHRVMYSQDKRKSNPNLPESASVKPVYIDSFPKLRALYCQYKSCVASALSGISTGNSIHQTANMILSMIYQKITKVGISSSNSSSPTSSNACSSLINSGEDAFQRPMLPGWEVLEALPFVLESILTACAHGRISSRELTTGLRDLVDFLPASLAAIIDYFSSEVTRGVWKLVPMNGTDWPSPAALLPSIELEINAILTHVGVEVPNCSSGGSPVMLPLPMAALVSLSITFKLDKSLEYMHAITGAALENCASGCPWPSMPIIGSLWAQKVRRWHNFIVVSGSRSVFRQNNESVAQLLRSCFTSFLGTLSVSTSKLTSECGVNGLLGSTITAPGAYPYVAPGFLFLRSCRNIHNVQYVNDIIVGLVTEYSNELAGRRSDAGSRHIKSNESSLSLAAQSAKEVATLGASLLCAAGGMLLVQELYKETIPTWLLSSRDMKKNNDSVASYILEGYAMAYLLILSGSIIWGVGTKLPPGTFSRRSRTIEVHLDFLAEVMEKKISLSCNPITWKTYVCCFVGFMVSLAPVWIQEVRVDTLKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVVESERMLPPS |
Length | 1128 |
Position | Tail |
Organism | Vigna radiata var. radiata (Mung bean) (Phaseolus aureus) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.124 |
Instability index | 46.82 |
Isoelectric point | 7.70 |
Molecular weight | 123343.36 |
Publications | PubMed=25384727
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP23039
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 360.98| 112| 127| 338| 461| 1
---------------------------------------------------------------------------
308- 413 (119.92/75.97) .......................KAGGnlRHLIVEaciarNL.M.DTSVY.FWPGYVS...TSVLSLSDSSPPEKSPWSMFME....................GT..PLNNTLIN.SLTMTPASSLAEiekLYYIALngSDVERPAAAkiLC....GASLGH
414- 539 (167.89/100.40) GWYIQEHVIHhviKLLASPLPpsHAGS..RSLLVD.....NMPM.LCAVLRGASSVDT...VHILSLHGVVPTVAAALLPLCE..................afGSikPTSNSTGDeSSTTYMAFSLAF...LFLIRL..WKFCRPPLD..LCitelGVAVGG
668- 760 (73.17/33.16) LESILTACAH...GRISSREL..TTGL..RDL.VD.....FLPAsLAAIIDYFSSEVTrgvWKLVPMNGTDWPSPAALLPSIEleinailthvgvevpncssgGS..P......................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 167.47| 52| 149| 801| 858| 2
---------------------------------------------------------------------------
801- 858 (81.37/74.48) CPWPSMPIIGSLWAQKVRRWhnfiVVSgSRSVfRQNNESVAQ.LLRSCFTSFLGTLSVS
957- 1009 (86.10/57.33) CAAGGMLLVQELYKETIPTW....LLS.SRDM.KKNNDSVASyILEGYAMAYLLILSGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 190.15| 68| 77| 100| 170| 3
---------------------------------------------------------------------------
100- 136 (51.09/29.30) .........................................LSKHRLVGTLINMGSCKIPlKCNYRFCQSPCWVPFDI
139- 215 (105.81/63.93) ENAMDSRQIPTKSAIDVLTEGIKTLQMLNQASwqetflalwLSALRLVQRERDPPEGPIP.HLVARLCVLLCIVPLAI
216- 247 (33.25/11.19) ANVLRDASEHNLSSVQVSMESEYTHEMKSDDS..............................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.92| 16| 30| 542| 557| 4
---------------------------------------------------------------------------
542- 557 (30.54/22.38) YILSLHNHRVMYSQDK
574- 589 (31.38/23.22) YIDSFPKLRALYCQYK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.47| 19| 24| 598| 616| 6
---------------------------------------------------------------------------
598- 616 (34.84/20.38) GISTGNSIHQT.ANMILSMI
624- 643 (29.63/16.22) GISSSNSSSPTsSNACSSLI
---------------------------------------------------------------------------
|