<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23029

Description U-box domain-containing protein 35 isoform X1
SequenceMWLPGAKESIIHRRGKGNGLVAVAVEKDKKGSRQALKWAADTLLSRGQTLVLIHVLHTTSSPFTSNSSTNLNIMNIFNSNNHSFNFNFSLFKCLGGIRSTNWPVTSPKKDKLVNITKDLFETFHCYCSRKDIHCLDVVLQDIDVVKGITEYVYYAAIENLVVGAASRHGFIRFKTSTPSSILKGAPDFCSVYVISKGRISSVRSAARRAPHASPLQRQIESLNDENGSENDTPCRRLSFKSNRKSSKAIGLQSESMNKIQSGRRSGTIGRLSMDFAEHDSDISFVSSDRPSSVRSSSVFYDHVECARNSRTSTSSDRSWGSTYMKPKFTEPCSPDHLVSDESSRSSLSSLQNHDEVEADVRRLRLELKQTMEMYSNACKEALTAQQKLLELHNWRVEEEKKIEDARVNQEAAEAIAEKEKEKSKAARETAEMATRLARLETKRRANVEGKCLKEAEEMRKALRNLQETDKRYRRYTLEEIEKATNEFSEAQKIGEGGYGPVYKCYLDHTAVAVKILRAGSAQGETQFNQELNILGAIRHPNMVLLVGACPEEGVLIYEYMENGSLEDCLFGGKKEEMMSWELRFGIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVSKISDVGLARLLPAAVAENETQCRMTAAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIILQLLTGRPAMGLALQVQQSIQNETFAQILDPSVPDWPLTEALSLANLALQCAQLCRKDRPDLGTVLLPQLQILREFARHHHEQPPQEQEVLSEPTSQHSGSPSTPSPSSTPPADYVYVI
Length799
PositionTail
OrganismVigna radiata var. radiata (Mung bean) (Phaseolus aureus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.07
Grand average of hydropathy-0.445
Instability index55.45
Isoelectric point7.07
Molecular weight89178.07
Publications
PubMed=25384727

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23029
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.09|      28|      96|     233|     275|       1
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  201-  231 (38.73/10.79)	SVRSaARRAPHASPLQRqiESLND.ENGSEND
  238-  266 (44.36/48.54)	SFKS.NRKSSKAIGLQS..ESMNKiQSGRRSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     135.25|      33|      96|     422|     454|       2
---------------------------------------------------------------------------
  357-  380 (30.02/20.49)	.........EADVRRLR..LELK...QTMEMYSNACKE
  381-  410 (26.36/16.92)	ALTAQQKLLELHNWRVE..EEKKiedARVNQE......
  422-  454 (49.97/39.93)	KSKAARETAEMATRLAR..LETK...RRANVEGKCLKE
  458-  486 (28.89/19.39)	MRKALRNLQETDKRYRRytLEEI...EKATNE......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     101.44|      23|      26|     270|     292|       3
---------------------------------------------------------------------------
  270-  292 (40.46/23.05)	RLSMDFAEH.....DSDISFVSSDRP.SS
  294-  321 (27.59/13.56)	RSSSVFYDHvecarNSRTS.TSSDRSwGS
  324-  345 (33.39/17.84)	.MKPKFTEP.....CSPDHLVSDESS.RS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     254.52|      81|     604|     101|     194|       4
---------------------------------------------------------------------------
  101-  194 (120.55/109.83)	NWPVTSPKkdKLVNItkdlfeTFHC..YCSRKDIHCLDVVLQDIDVVKGITEYVYY..AAIENLVVGAASRHGfirFKTSTPSSILKGAPDFcsVYVI
  715-  799 (133.97/86.72)	DWPLTEAL..SLANL......ALQCaqLCRKDRPDLGTVLLPQLQILREFARHHHEqpPQEQEVLSEPTSQHS...GSPSTPSPSSTPPADY..VYVI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23029 with Med32 domain of Kingdom Viridiplantae
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