<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23017

Description heat shock cognate 70 kDa protein 2
SequenceMAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQSDIKLWPFKVISGAGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVSPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDMDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVEAKNSLENYAYNMRNTIKDEKIASKLPADDKKKIEDAIDQAIQWLDGNQLGEADEFEDKMKELESICNPIIAKMYQGAGGDAGGAMDEDGPAPASGSGAGPKIEEVD
Length649
PositionUnknown
OrganismVigna radiata var. radiata (Mung bean) (Phaseolus aureus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.06
Grand average of hydropathy-0.426
Instability index34.66
Isoelectric point5.11
Molecular weight71015.52
Publications
PubMed=25384727

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23017
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.19|      18|      21|      38|      55|       1
---------------------------------------------------------------------------
   16-   33 (19.09/11.23)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.57/24.67)	NR..TTPSYVAFTDSER..LIG
   60-   78 (24.54/16.66)	NQvaMNPTNTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     219.16|      72|     189|     121|     218|       2
---------------------------------------------------------------------------
  141-  218 (102.05/140.67)	STVKNAVVTVPAYFNDSQRQATKDagVISGLNVMRIINePTaAAIAYGLD.KKATSSGEKNVLIFDLggGTFDVSLLTI
  335-  407 (117.10/85.59)	STVHDVVLVGGSTRIPKVQQLLQD..FFNGKELCKSIN.PD.EAVAYGAAvQAAILSGEGNEKVQDL..LLLDVSPLSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     324.11|     104|     287|     228|     333|       3
---------------------------------------------------------------------------
  228-  333 (167.09/122.90)	TAGDTHLGGEDFDnRMVNHFV......QEFKRK..NKKDISGNARALRRlRTACERAKRTLSSTAQTTIE..IDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMD
  510-  623 (157.02/106.66)	TNDKGRLSKEEIE.KMVQEAEkykaedEEHKKKveAKNSLENYAYNMRN.TIKDEKIASKLPADDKKKIEdaIDQAIQWLDGNQLGEADEFEDKMKELESICNPIIAKMYQGAGGD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.89|      33|      44|     426|     459|       4
---------------------------------------------------------------------------
  426-  459 (52.35/44.44)	IPTKKE...QVFSTYSDNQPGVLiQVYEGERTRTRDN
  470-  505 (52.54/39.19)	IPPAPRgvpQINVCFDMDANGIL.NVSAEDKTTGQKN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23017 with Med37 domain of Kingdom Viridiplantae
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