<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP23012

Description Uncharacterized protein
SequenceMKVVNLKQAILQAWKERWSDYQWAVNIKKNFPKGATWDYLNFAEALMEQAMIGPSPNPLILSYLRYAISSQMVSYSSVLTAISKFDGFSRELCVKSLLEIMDMFCHRLNCHGKAEECIGLCRALLGVVVWLLQGCAFYCDQLRELGPLASTEAILRACQERLYGLMSSTKNKALVHIARLEDPGSWGNVEETMIVVTDGLCNVPNETLRTSIEETLALVKSIPLMLSVQSEPPAHASFPSVHAFIMLEGTMNLTGETQPLVEQLMMIKRMQRIPGPLFVLEIWKACFTGLIESPEGTEELKWTAFTFLKIPQVLLRLKKYPQGDKGQDFTEDVNIAFQCLLKLTPLLDKADQRCNCDCLGMLLQECNKLGLLSDSNTEGLTSKRNEDREFAPRLKTAENANIQPNPGLILRAEPTVTNILKTVDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIKLNEFPKHISGEGSKSASVRAQLFDISFLMLCHVVQTYGSEVILSDPSPSVETPFFETWLQTCMPEEGKTLNPDHPCFRPEPGKVESLVTLLNNSSEMKLVQVKWHEICLSTPAAILEVLNAWENGVLSVEAVQKITDNIKGKVCSMAICAVAWLVAHVRMLGRDEREKPQTMIRQLVTPLYAENTMQFYNERVVIMSSIMEHMCADVFQQTGALLRSPIEGQEPIAYRNLLPSKEPIHQSLSKQFQVVLRKGWVDSRALHLFESLLNMGGVFWFTNNLIKELLKETRQEWASRVVELLYSIFCLDMQQITLTLLGTILPNLLTDSAHWHSLADPPGKALAKLSVWCALSSYSSHHKGPFSARQRKRQREDIEDYNSLFPLDDTQPSKLMRLLSSNEDEPVALSSPGDRSMSSSLSPSQLHTVNMRDPLNRVLANLFLLFSSILGSKMAGPHTQFVQSFLEECVECLEQGSRGSILQFMPFTMVSELVKLPALAKPKVVLAITDLNLPLGRRVAAKAISAL
Length989
PositionTail
OrganismPoecilia reticulata (Guppy) (Acanthophacelus reticulatus)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata> Ovalentaria> Atherinomorphae> Cyprinodontiformes> Poeciliidae> Poeciliinae> Poecilia.
Aromaticity0.07
Grand average of hydropathy-0.027
Instability index49.48
Isoelectric point6.44
Molecular weight110484.29
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
enteric nervous system development	GO:0048484	IEA:Ensembl
interstitial cell of Cajal differentiation	GO:0061453	IEA:Ensembl
retinal cone cell development	GO:0046549	IEA:Ensembl
thymus development	GO:0048538	IEA:Ensembl









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP23012
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.07|      15|      17|     273|     288|       1
---------------------------------------------------------------------------
  273-  288 (24.94/21.21)	IPGPLFVLEI.WKAcFT
  291-  306 (24.13/13.72)	IESPEGTEELkWTA.FT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.07|      11|      17|     141|     151|       2
---------------------------------------------------------------------------
  141-  151 (19.13/10.95)	QLRELGPLAST
  159-  169 (19.94/11.73)	QERLYGLMSST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     211.97|      69|     222|     182|     256|       3
---------------------------------------------------------------------------
  182-  256 (108.30/85.55)	DPGSWGNVEETmivVTDGLCNVPNETLRtSIEETLALV......KSIPLMLSVQSEPPAHASFPsvHAFIML.EGTMNLTGE
  405-  480 (103.67/65.08)	NPGLILRAEPT...VTNILKTVDADHSK.SPEGLLGVLghmlsgKSLDLLLAAAAATGKLKSFA..RKFIKLnEFPKHISGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.05|      17|      20|     861|     879|       4
---------------------------------------------------------------------------
  861-  877 (28.67/19.53)	LSSNEDEPVALSSPGDR
  883-  899 (30.38/13.84)	LSPSQLHTVNMRDPLNR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.98|      27|     392|     496|     531|       7
---------------------------------------------------------------------------
  496-  531 (40.86/46.47)	FLMlchvvqtYGSevILSDPSPSVETPFFETWLQTC
  905-  931 (48.13/29.92)	FLL.......FSS..ILGSKMAGPHTQFVQSFLEEC
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP23012 with Med24 domain of Kingdom Metazoa
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