<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22998

Description Uncharacterized protein
SequenceMKVVNLKQSILQAWKERWSDYQWAINIKKNFPKGATWDYLNLAEALMEQAMIGPSPNPLILSYLKYAISSQMVSYSSVLLAISKFDDFSRELCVKALLEIMDMFCHRLSCHGKAEECIGLCRALLGGVVWLLTGCAWYCERLRELGPSTSTDASLKGCQERLNNLLVSTKNRALVHIARLEDQASWTNVEQALHRLTDSLSRMTNHTLIGNLEECVSLVKSIPTMLSMRPDPPHHASFPSVHAFIMLEGTMNLTGETQPLVEQLMIIKRMQRIPTPLFVLEIWKACFTGLIESPEGTEELKWTAFTFLKLPYPLVDLQQDFMDDVNIAFEYLLKLTPLLDKADQRCNCDCLSMLLQECNKLGLLSDSNTTNLTSKRAEDREYAPRMKTAENANIQPNPGLILRAEPTVTNILKTVDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFINVGFSETNWILMSWTILVSLLAAKSASVRALLFDISFLMLCHVVQTYGSEVILSDPSPSGETPFFETWLQTCMPEEGKTLNPDHPCFRPESGKVESLVALLNNSSEMKLVTYSCPLSVTTLSPTLFPSSDLLHPLPLSGKVCSMAICAVAWLVAHVRMLGLDEREKPQTMIRQLMTPLYGENTLQFYNERVVIMSSILEHMCADVFQQTGLALRPPMEGQEPIPYRNLLPAKEPIHESLSKQFRSVLWKGWVDSHALHLFESLLHMGGVFWFTNNLIKELLKETRQEWANRVVELLYSIFCLDTQQITLTLLGHILPNLLTDPARWHSLADPPGKALAKLSVWCALSSFSSHHKGQASARQRKRQREDIEDYSNLFPLDDTQPSKLMRLLSSNEDEPVVLSSPGDRSMSTSLSASQLHTVNMRDPLNRVLANLFLLISSILGSKTAGSHTQFVQSFMEECVECLEQGSRGSILQFMPFTMVSELVKLPALAKPKVVLGITDLTLPLGRRVAAKAISAL
Length978
PositionTail
OrganismEsox lucius (Northern pike)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Protacanthopterygii> Esociformes> Esocidae> Esox.
Aromaticity0.07
Grand average of hydropathy-0.001
Instability index45.54
Isoelectric point6.36
Molecular weight109404.01
Publications
PubMed=25069045

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22998
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.74|      12|      15|     701|     712|       1
---------------------------------------------------------------------------
  701-  712 (24.30/15.08)	KQFRSVLWKGWV
  718-  729 (22.43/13.33)	HLFESLLHMGGV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.94|      13|      15|      79|      93|       2
---------------------------------------------------------------------------
   79-   93 (19.82/14.42)	LLAIskFDDFSREL.C
   97-  110 (23.12/10.98)	LLEI..MDMFCHRLsC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      24.51|      10|      16|     176|     188|       3
---------------------------------------------------------------------------
  186-  201 (12.35/ 8.60)	WTNveqalhRLTDSLS
  203-  217 (12.16/ 9.72)	MTN.htligNLEECVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.68|      19|      36|     442|     460|       4
---------------------------------------------------------------------------
  442-  460 (30.03/19.86)	LLAAAAATGKLKSFARKFI
  480-  498 (29.65/19.52)	LLAAKSASVRALLFDISFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.55|      14|      16|     273|     288|       6
---------------------------------------------------------------------------
  283-  299 (16.47/12.68)	WKAcFT.glIESPEGTEE
  302-  318 (22.08/ 6.83)	WTA.FTflkLPYPLVDLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.16|      16|     216|     139|     161|       7
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  121-  136 (31.21/13.36)	CRAL..LGGVVWL...LTGCA
  139-  159 (20.95/26.38)	CERLreLGPSTSTdasLKGCQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.69|      16|      25|     386|     401|       8
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  386-  401 (27.67/17.51)	MKTAENANIQPNPGLI
  412-  427 (26.02/16.03)	LKTVDADHSKSPEGLL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22998 with Med24 domain of Kingdom Metazoa
Unable to open file!