<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22975

Description Uncharacterized protein
SequenceMKMVNLKQAILQAWKDRWSDYQWAINIKKNFPKGVTWDYLNLAEALMEQAMIGPSPNPLILSYLKYAISSQMVSYSSVLMAISKFDDFSRELCVKSLLEIMDMFCHRLSCHGKTEECIGLCRALLAVVVWLLQGCAWYCEKLRELGPSASTETSLGACQERLQSLMNSTKNRALVHIARLEDQGSWSNVEQAVLNLTDGLSSVTNSKLHTKLEESLSLVKSIPLMLSEQSDPPVYASFPSVHAFIMLEGTMNLTGEIQPLVEQLMMIKRMQRIPAPLFVLEIWKACFTGLIESPEGTEELKWTAFTFLKIPQVLLRLKKYPQSDRGQDFMEDVNIAFQYLLKLTPLLDKADQRCNCDCLGMLLTECNKLGLLSDSNTVNLTSKREFAPRLKTAENANIQPNPGLILRAEPTVTNILKTVDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIKLNEFPKHISGEGSKSASVRALLFDISFLMLCHVVQTYGSEVILSDPSPSGETPFFETWLQTCMPEEGKTLNPENPCFRPEPGKVESLVTLLNNSSEMKLVQVKWHEICLSIPAAILEVLNAWENGVLSVEAVQKITDNIKGKVCSMAICAVAWLVAHVRMLGRDEREKPQTMIRQLVTPLYGENTLQFYNERVIIMSSIMEHMCADVFQQTGATLRSPVEGQEPIPYRNLLPPKEPIHTALSKQFQAVLRKGWVDSRALHLFESLLNMGGVFWFTNNLVKELLKETRQEWANRVVELLYSIFCLDTQQITLTLLGTILPNLLTDSAHWRSLADPPGKALAKLSVWCALSSYSSHHKGSFSARQRKRQREDIEDYNSLFPLDDTQPSKLMRLLSSNEDEPVALSSPGDRSMSSSLSASQLHTVNMRDPLNRVLANLFLLISSILGSKMAGPHTQFVQSFMEECVECLEQGSRGSILQFMPFTMVYELVKLPALAKPKVVLAITDLTLPLGRRVAAKAISAL
Length985
PositionTail
OrganismAstatotilapia calliptera (Eastern happy) (Chromis callipterus)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata> Ovalentaria> Cichlomorphae> Cichliformes> Cichlidae> African cichlids> Pseudocrenilabrinae> Haplochromini> Astatotilapia.
Aromaticity0.07
Grand average of hydropathy-0.028
Instability index47.28
Isoelectric point6.84
Molecular weight110176.01
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
enteric nervous system development	GO:0048484	IEA:Ensembl
interstitial cell of Cajal differentiation	GO:0061453	IEA:Ensembl
retinal cone cell development	GO:0046549	IEA:Ensembl
thymus development	GO:0048538	IEA:Ensembl









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22975
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.42|      25|      26|     143|     167|       1
---------------------------------------------------------------------------
  108-  133 (29.28/15.29)	..LSCHGKTEECIGLCRALLAvvvWLLQ
  143-  167 (41.04/24.33)	RELGPSASTETSLGACQERLQ...SLMN
  172-  195 (37.09/21.30)	RALVHIARLEDQ.GSWSNVEQ...AVLN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.82|      11|      31|     304|     314|       2
---------------------------------------------------------------------------
  304-  314 (19.61/12.78)	AFTF.LKIPQVL
  336-  347 (15.21/ 8.13)	AFQYlLKLTPLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.46|      23|      33|     674|     696|       4
---------------------------------------------------------------------------
  674-  696 (40.45/23.56)	QQTGATLRSP.VEGQEPIPYRNLL
  708-  731 (33.02/18.02)	KQFQAVLRKGwVDSRALHLFESLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     234.51|      66|     675|     201|     282|       5
---------------------------------------------------------------------------
  202-  282 (102.29/91.11)	SVTNSKL...HTKleeslslvksiplmLSEQSDPPVYASFPSVHAFiMLEGTMNLTGEIQPLVEQLM...MIKRMQRIPA...PLFVLEI
  857-  903 (60.38/29.85)	...........................LSSNEDEPVALSSPG.......DRSMSSSLSASQL.HTVN...MRDPLNRVLA...NLFLL..
  906-  966 (71.83/38.82)	SILGSKMagpHTQ..........................F..VQSF.MEECVECLEQGSRGSILQFMpftMVYELVKLPAlakPKVVLAI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.06|      13|     113|     289|     301|       7
---------------------------------------------------------------------------
  289-  301 (23.61/16.00)	GLI..ESPEGTEELK
  403-  417 (16.45/ 8.70)	GLIlrAEPTVTNILK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22975 with Med24 domain of Kingdom Metazoa
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