<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22974

Description Uncharacterized protein
SequenceMVSYSSVLMAISKFDDFSRELCVKSLLEIMDMFCHRLSCHGKTEECIGLCRALLAVVVWLLQGCAWYCEKLRELGPSASTETSLGACQERLQSLMNSTKNRALVHIARLEDQGSWSNVEQAVLNLTDGLSSVTNSKLHTKLEESLSLVKSIPLMLSEQSDPPVYASFPSVHAFIMLEGTMNLTGEIQPLVEQLMMIKRMQRIPAPLFVLEIWKACFTGLIESPEGTEELKWTAFTFLKIPQVLLRLKKYPQSDRGQDFMEDVNIAFQYLLKLTPLLDKADQRCNCDCLGMLLTECNKLGLLSDSNTVNLTSKREFAPRLKTAENANIQPNPGLILRAEPTVTNILKTVDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIKLNEFPKHISGEGSKSASVRALLFDISFLMLCHVVQTYGSEVILSDPSPSGETPFFETWLQTCMPEEGKTLNPENPCFRPEPGKVESLVTLLNNSSEMKLVQVKWHEICLSIPAAILEVLNAWENGVLSVEAVQKITDNIKGKVCSMAICAVAWLVAHVRMLGRDEREKPQTMIRQLVTPLYGENTLQFYNERVIIMSSIMEHMCADVFQQTGATLRSPVEGQEPIPYRNLLPPKEPIHTALSKQFQAVLRKGWVDSRALHLFESLLNMGGVFWFTNNLVKELLKETRQEWANRVVELLYSIFCLDTQQITLTLLGTILPNLLTDSAHWRSLADPPGKALAKLSVWCALSSYSSHHKGSFSARQRKRQREDIEDYNSLFPLDDTQPSKLMRLLSSNEDEPVALSSPGDRSMSSSLSASQLHTVNMRDPLNRVLANLFLLISSILGSKMAGPHTQFVQSFMEECVECLEQGSRGSILQFMPFTMVYELVKLPALAKPKVVLAITDLTLPLGRRVAAKAISAL
Length914
PositionTail
OrganismAstatotilapia calliptera (Eastern happy) (Chromis callipterus)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata> Ovalentaria> Cichlomorphae> Cichliformes> Cichlidae> African cichlids> Pseudocrenilabrinae> Haplochromini> Astatotilapia.
Aromaticity0.07
Grand average of hydropathy-0.013
Instability index46.95
Isoelectric point6.48
Molecular weight101919.41
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22974
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.24|      29|      35|      26|      54|       1
---------------------------------------------------------------------------
   26-   54 (54.75/29.10)	LLEIMDMFCHR...LSCHGKTEECIGLCRALL
   60-   91 (48.49/25.05)	LLQGCAWYCEKlreLGPSASTETSLGACQERL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.82|      11|      30|     233|     243|       2
---------------------------------------------------------------------------
  233-  243 (19.61/11.96)	AFTF.LKIPQVL
  265-  276 (15.21/ 7.64)	AFQYlLKLTPLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.35|      25|      35|     603|     637|       3
---------------------------------------------------------------------------
  612-  636 (45.95/37.00)	PVEGQEPIPYRNLLPPKEPIHTALS
  773-  797 (42.40/14.18)	PLDDTQPSKLMRLLSSNEDEPVALS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     228.32|      77|     675|     130|     211|       5
---------------------------------------------------------------------------
  130-  211 (118.53/97.32)	SSVTNSKLHT.KLEESLSLV.KSIPLMLS.....EQSDPpvYASFpsVHAFiMLEGTMNLTGEIQPLVEQLM...MIKRMQRIPA...PLFVLEI
  806-  895 (109.79/73.12)	SSLSASQLHTvNMRDPLNRVlANLFLLISsilgsKMAGP..HTQF..VQSF.MEECVECLEQGSRGSILQFMpftMVYELVKLPAlakPKVVLAI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.97|      39|     135|     300|     342|       6
---------------------------------------------------------------------------
  300-  342 (58.31/51.99)	LLSDSNTVNLTSkrEFAPRLKT...AENANIQP.NPglILRAEPT.....VT
  436-  483 (60.66/40.41)	ILSDPSPSGETP..FFETWLQTcmpEEGKTLNPeNP..CFRPEPGkveslVT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.14|      16|      35|     644|     660|       9
---------------------------------------------------------------------------
  644-  660 (23.88/16.53)	RKGWVDsRALHLFESLL
  681-  696 (28.26/15.27)	RQEWAN.RVVELLYSIF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22974 with Med24 domain of Kingdom Metazoa
Unable to open file!