<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22962

Description Uncharacterized protein
SequenceMAMVGHVPVAKTQQASPLRLVEFRMPGKMASGREVVEETVARVIEVIEEKIFVAVGKSVKECKSMLFWALQKSGGKRICIIHVHQPAQMIPFMGTKFPASKLKEQEVRAYWEIERQEMLKMLGEYLFLCRKMGVRAEKLYVEMESIEKGILELISQHGIRKLVMGAAADKRYSKNMMDIKSKKAVSVCLQAPASCHIWFICKGHLIQTRKGALDGTDTDVRPSSQQKSPNTEAGQSNIMRSQSILFGQHHHVKLTNPAQDLFRKVRSLNVNGPGGRLTTPTSPDGGPSTPSRSDADGSSDQYDALSRSTSQNSVLSSRSSSGMANVALIPLLGIEGSEIGSELSTVPHQKDGSIEDPLYDQLEQAMAEAENSRFEASEEAVRCAKEERDVVEAIRKAKASESLYTEESKRRTVVEEELAKEKEELEKINKELEKINKEQDEVMGELCIAQDHKSLLEKQIEESDEMVKELEQKIISAVGLLQNYKKERDHLHKGRDYALKEAEELRRNQTEASSTHMPRFFSDFSFSEIEEATHHFDPSRKIGEGGYGNIYKGVLRQTQVAVKMLDSNSMQGPAEFQQEVNVLSKMRHPNLITLVGACPEAWTLIYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSSKPHSIVHGDLKPANILLDENFVTKLSDFGICRLLDHKEGSSNNTTICRTDPKGTFVYMDPEFVSTGELSPKSDVYSFGIILLRLLTARQALGITKEVRYALDKGTLKTLLDPLAGDWPFVQAEMLAHMALRCCEMNRKNRPDLASEVWRVLEPMKASCGTSSFSQLGSEEHFQPPSYFTCPIFQCRK
Length836
PositionTail
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
Aromaticity0.06
Grand average of hydropathy-0.444
Instability index53.48
Isoelectric point6.41
Molecular weight93793.23
Publications
PubMed=16973872

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22962
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.50|      14|      44|     658|     671|       2
---------------------------------------------------------------------------
  658-  671 (24.15/16.24)	DLKPANILLDENFV
  699-  712 (27.35/19.37)	DPKGTFVYMDPEFV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.38|      25|      25|     480|     504|       4
---------------------------------------------------------------------------
  462-  486 (33.71/20.31)	ESDEMVKEL...EQKIISAVGLLQNYKK
  487-  510 (38.99/24.60)	ERDHLHKGR...DYALKEAEELRRN.QT
  511-  538 (34.68/21.10)	EASSTHMPRffsDFSFSEIEEATHHFDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     110.84|      29|      29|     110|     138|       7
---------------------------------------------------------------------------
   88-  108 (25.41/13.43)	.......Q..MIPFMGTK.FPASK..LKEQEVR
  110-  138 (52.19/35.64)	YWEIERQE..MLKMLGEYLFLCRK..MGVRAEK
  140-  170 (33.24/19.92)	YVEMESIEkgILELISQHGI..RKlvMGAAADK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.00|      20|      21|     373|     392|       8
---------------------------------------------------------------------------
  373-  392 (31.83/17.98)	RFEASEEAVRCAKEERDVVE
  396-  415 (30.17/16.70)	KAKASESLYTEESKRRTVVE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22962 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EIGSELSTVPHQKDGSIEDPLYDQLEQAMAEAENSRFEASEEAVR
2) GALDGTDTDVRPSSQQKSPNTEAGQSNIMRSQ
3) RKVRSLNVNGPGGRLTTPTSPDGGPSTPSRSDADGSSDQYDALSRSTSQNSVLSSRSS
338
211
263
382
242
320










Molecular Recognition Features






MoRF SequenceStartStop




NANANA