<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22941

Description Uncharacterized protein
SequenceMESEMRRRKLELKQTMDLYNAACREALTAKRKATELDRWRIEEERRLEESRFSEEAALSIIEQEKARCREAIDAAEEAEKRAAIEAQRRLNIEKTLKEAAKTKRAKDNLSYHGIRYRRYSIEEIEVATQYFSESKKIGGGGYGPVYNCYLDHTPVAVKVLRPDAAQGRSQFQREVEVLSLIRHPNMVLLLGACPEYGILVYEYMAKGSLEDCLFKRGNTPALSWQIRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDNNYTSKISDVGLARLVPTTSENVTQYHMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGILLLQVITAKPPMGLTHIVEQAIENETLKEVLDSDVPDWPIEETLCFAKLALQCAELRRKDRPDLGTEVLPELNRLRDYAEEKMNYLFLAKAFGPSPNHSLASITPPISQISITPTNLSQTSATPTNLSQVSITQEAMSNTVVGNLGSPKSQSSS
Length475
PositionTail
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
Aromaticity0.07
Grand average of hydropathy-0.412
Instability index57.95
Isoelectric point6.17
Molecular weight53416.33
Publications
PubMed=16973872

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22941
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.70|      35|      42|      21|      57|       1
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   21-   57 (55.83/41.24)	AACREALTAKRKATEldRWRIEEERRLEESRFSEEAA
   66-  100 (57.87/36.53)	ARCREAIDAAEEAEK..RAAIEAQRRLNIEKTLKEAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.23|      17|      17|     425|     441|       2
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  425-  441 (31.98/19.21)	TPP.ISQISITPTNLSQT
  444-  461 (26.25/14.70)	TPTnLSQVSITQEAMSNT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     165.23|      48|     161|     194|     241|       3
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  194-  241 (84.99/59.86)	PEYGILVYEYMAKGSLEDCLFKRGNTPALSWQI.....RFRIAAEIATGLLFL
  357-  409 (80.24/56.10)	PDWPIEETLCFAKLALQCAELRRKDRPDLGTEVlpelnRLRDYAEEKMNYLFL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.48|      36|      59|     250|     286|       4
---------------------------------------------------------------------------
  250-  286 (57.05/50.63)	VHRDLKPGNILLDNNYTSKiSDVGLARLVPTTSENVT
  312-  347 (60.44/48.19)	VKSDVYSLGILLLQVITAK.PPMGLTHIVEQAIENET
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22941 with Med32 domain of Kingdom Viridiplantae
Unable to open file!