<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22937
Description |
Uncharacterized protein |
Sequence | MCCFQCHSRVHLIWYVMLAVGSVSMNGGRISQLLLNGYPVSLQWLSSKSSTPTSSKSAFEEKFLSQHSQTSARWPNFLCVCSVFSSGSVQLHWSPSQNNTSPKWFCTSKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQATPMASVGNGVPPSVKPPNWSGFAPLAAYLFNWQEHLMSEVKQGKKQTDEDFTDTITLHCSPVSNFSAYVSPEAAAQSAATTTWGSGVSAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPLITGWRVQRWESSVQPVVLHPIFGNPTSGFGGQAPMQTVWVSKVDTSIPPTNDFKNYQPAAAGPISDVRKTSDSGAEKTKRVIFDPSDLPSDVRTLARIVYSAHGGEIAVAFLGGGVHIFSGTNFTLVDNHQINVGSTIAAPAFSSTSCCSASVWHDTSKDHTVLKIIRVLPPAVPSSQVKANSAIWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPTSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGRGIESALINPSALVSEPWQASGETLSGIDPEAMTVEPNLVPSIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQSSASPAPSQGGQSGSTSSTGSTQMQAWVQGAIAKISSTTDGVTGSTPNPISGPSSVMPISINTGTFPGTPAVRLIGDCHFLRRLCQLLLFCFFFRRTQLPRFAGSAQRNSTDTNVQKPQSGAPGKVEEINTVTSKPAPAMVRSDEGQTARGGQVMPGAKPVEDGPAGRHRVGSGNAGQGYSFEEVKVLFRILMDLCRRTATLAHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDAEDMGSDDTLKLNSDPLDFSSLENCDVYYSAHGLWPRKRRLSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAMWKTGLEGVWYKCIRCLRQTSAFASTGAAANPPNQNEREAWWISRWAYGCPMCGGTWVRVV |
Length | 1070 |
Position | Tail |
Organism | Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
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Aromaticity | 0.08 |
Grand average of hydropathy | -0.146 |
Instability index | 38.51 |
Isoelectric point | 6.80 |
Molecular weight | 115005.65 |
Publications | PubMed=16973872
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP22937
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 169.04| 38| 41| 295| 335| 1
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142- 178 (55.06/24.09) .PstVVVWEVTP.GPGNGFQA.TPMASV.GNGVPPSVKPPN
295- 332 (71.45/41.50) QP..VVLHPIFG.NPTSGFGGQAPMQTVWVSKVDTSIPPTN
338- 370 (42.52/18.69) QP..AAAGPISDvRKTSDSGAEKTKRVIF....DPSDLP..
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.22| 19| 39| 650| 668| 2
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650- 668 (34.01/15.69) VTSPTQ..SSASPAPSQGGQS
690- 710 (27.22/11.07) ISSTTDgvTGSTPNPISGPSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 83.04| 23| 62| 7| 30| 3
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7- 30 (38.57/27.08) HSRVHLIWYVMLAVGSVsMNGGRI
67- 89 (44.47/26.98) HSQTSARWPNFLCVCSV.FSSGSV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.45| 38| 44| 981| 1023| 4
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970- 1016 (56.80/39.74) GLWPRkrrlseRDAAFglnTSVGLGAYLGIMGSRRDVVTAMWKTGLE
1017- 1060 (67.65/43.21) GVWYKcirclrQTSAF...ASTGAAANPPNQNEREAWWISRWAYGCP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.92| 20| 44| 228| 247| 6
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228- 247 (35.49/19.44) YVSPEAAAQSAATT.....TWGSGV
270- 294 (33.43/17.87) YMSPYDPDEGPLITgwrvqRWESSV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.00| 17| 40| 460| 479| 7
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460- 479 (25.93/28.46) VKANSAIwerAIAERFWWSL
501- 517 (28.07/18.61) VSLNSVI...AVLDADFHSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 122.92| 39| 60| 520| 558| 8
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520- 558 (66.54/48.91) SQHRQQYGPSLDRI..KCRLLEGTNAQEVRAM...VLDMQARLL
578- 621 (56.37/40.14) SEPWQASGETLSGIdpEAMTVEPNLVPSIQAYvdaVLDLASHFI
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