<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22929

Description Uncharacterized protein
SequenceMFHLILFTRKFKTTDIPGNVSKGAPGFCSVYVISKGKISSVRSASGPPPPKHSIQTQMQSRDTVETLFKSSLGPRVPERSPYTLQGLQEDMEIKSPFTRRGGIAKYEPSIPDSDISFVSSGRPSIDHTFPAIYDAFETGMTPRLSNAFETGMTPRLSNGSDYDYRSFGSLYSGNKSIDSSSQYNFSSTSQESSNTSWSSSQNMDDMESEMRRLRLELKQTMDMYSSACREALTAKQKARELHHWKLEEQQRSEGARLAEEAALQLVAKERAKCKAAIEAAESSQRIAELELQKRLNAEMIAQKEFQEKNKALASIANSDLRYRKYTIEEIEAATDEFSNSLKIGEGGYGPVYRSYLDHTPVAIKVLRPDAAHGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFHRGNSPPLSWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSIANTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGILLLQIITAKPPMGLTHHVERAIEKGTFAEMLDPAVLDWPIEEAMNFAKLSLCCAELRRKDRPDLGAVILPELKRLRELAEENMPSVMPGGSTGSSPYHSQFSSVQDVITASYNLDMIAQEATQAHHLEEEDEGRLKNTLL
Length668
PositionTail
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
Aromaticity0.07
Grand average of hydropathy-0.436
Instability index50.52
Isoelectric point6.04
Molecular weight74587.74
Publications
PubMed=16973872

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22929
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     231.72|      97|     457|      37|     191|       1
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   37-   91 (59.43/167.77)	KISSVRSASGPPPPKHSIQTQMQSRDTVETLFKSSlgprvPERSPYTLQGLQEDM...............................................................................................................................
  143-  191 (49.34/19.71)	..................................................................................eikspftrrggiakyepsipdsdisfvssgrpsidhtfpaiydafetgmtpRLSNAFETGMtPRLSNGSDYDYRSFGSLYSGNKSIDSSSqYNFSSTSQE
  474-  523 (64.96/14.67)	KISDVGLARLVPPSIANTVTQYRMTSTAGTFCYID.....PEYQQTGMLGIKSDI...............................................................................................................................
  602-  648 (57.99/ 0.00)	.......................................................yslgilllqiitakppmglthhveraiekgtfaemldpavldwpieeamnfaklslccaelrrkdrpdlgavilpelkRLRELAEENM.PSVMPGGSTGSSPYHSQFSSVQDVITAS.YNLDMIAQE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.30|      42|      42|     208|     249|       2
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  208-  249 (70.63/48.83)	SEMRRLRLELK.QTMDMYSSACREALTAKQKARELHHWKLEEQ
  252-  294 (58.67/39.34)	SEGARLAEEAAlQLVAKERAKCKAAIEAAESSQRIAELELQKR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22929 with Med32 domain of Kingdom Viridiplantae
Unable to open file!