<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22924
Description |
Uncharacterized protein |
Sequence | MDANNRRPTALGGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKVAVRFEEKIYTAATNQSDYLRKISLKMLTMETKSQNTIPTGNGNKPLDPGASHSMPPQVHNQGQSLPISLSTNQPQACQQLSQNMQNSMSSNGVQSSAGLQSAMPSVSSLTQTIPNTVGQNANMQSISGVSQNPVGNSMGQGIPSNMFVNSQRQMPGRQQVVPPQQQQQSQNPQQYLYQQQIQQQLLKQKLQQGNHPHSHVQSHIHQQQQQQNLLQPNQLQSGLQTSTVMQPSMMQTVSGLQQNQPSSVQQSTQPMLQQHPQSVLRQQQQPQQSAGIHQQQTPMMQQPLLPPQQQLMGQQSNTTNMSQNQLTGQQNIVGDLQQQLGQQNNLQNLQQQQLMAQQNNLSSMHQQQLGPQSNVTGLQQQQLLGAQPGNSSMQSNQHSLHMLQQPKVTLQQQAQQSGSALLPNQGQQSHSQLPQQQLTAQIQSQPGQLQQQSNPLQHDLQQRLQASGSLLQQSNVIDQQKQLYQPQRALPETSSTSLDSTAESGHANGADWQEEIYQKIKVMKETYLPEINEMYQRIATKLQQHDPLPQQPKSEQLEKLKVLKVMLERLITFLQVSKNNITPNFKEKLGFYEKQIVGFLNPSRYRKPIPNLQQGQPPQPRIQPMQQPQSQVPQLQSHENQLIPQLQSMNTQGSVPQMQQNNMSSLLHNSLSTLSGDSTSQSNMMNPIQPGSNLDSGQGNALSSLQQTPVGSVQKNLVSISQPTKVNTLSTQSGASMLQPNIPLQSNSNMIQHQHLKQQQQQHEQQMLQTQQLKRLQQHQNLMQNQQMQQQQLHQQAPSPMPGDSDKPVSGISSLLNTGNIVHQPSVAQAPAPSLAIGTPGISASPLLAEFTSPDGAHGGALTTVSGKSNVTEQSLECLIKAVKSLSPKALSASVGDIGSVVSMIDRIAGSAAGNGSRAAAGEDLVAMTGCHLLSFLSFLFFTCFSQHGNSRE |
Length | 997 |
Position | Tail |
Organism | Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
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Aromaticity | 0.03 |
Grand average of hydropathy | -0.784 |
Instability index | 71.27 |
Isoelectric point | 9.29 |
Molecular weight | 109829.82 |
Publications | PubMed=16973872
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Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | chromatin DNA binding GO:0031490 IBA:GO_Central
transcription coactivator activity GO:0003713 IEA:InterPro
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GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP22924
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
7| 962.67| 126| 126| 211| 336| 1
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23- 173 (106.89/20.29) .........RTQLQPDSRQRI....................vNKI..............MET...LKR.HLPF.SGQ...EGL...QelkkvavrfeekiytaatNQSDYL..RKI..SLKM...LtmETKSQntiptgNGNKPLDPGASHsmppqVHNQGQ......SLPIsL...STN..........QPQACQQLSQNMQNSMssngVQS.SAGLQSA.....MP...SVSSLTQT...I
174- 315 (200.20/46.75) ....PNTV.GQNANMQSISGVsqnpvgnsmgqgipsnmfvnsQRQ..............MPG...RQQ.VVPP.QQQ...QQS...Q..................NPQQYLYQQQI..QQQL...L..KQKLQ......QGNHPHSHVQSH.....IHQQQQ......QQNL.L...QPN..........QLQSGLQTSTVMQPSM....MQT.VSGLQQN.....QP..SSVQQSTQP...M
316- 446 (148.30/32.03) LQQHPQSVLRQQQQPQQSAGI....................hQQQ..............TPM...MQQpLLPP.QQQlmgQQS......................NTTN.MSQNQLtgQQNIvgdL..QQQLG......QQNN....LQ.........NLQQ......QQLM.A...QQN..........NLSSMHQQQ..LGP......QSN.VTGLQQQqllgaQPgnSSM.QSNQHslhM
447- 533 (116.34/22.97) LQQ.PKVTL..QQQAQQSGSA.................llpnQ...............................GQQ...SHS...Q..................LP.....QQQL..TAQ..........................IQSQ.....PGQLQQ......QSNP.L...QHD...........LQQRLQAS....GSL....LQQ.SNVIDQQ............KQLYQP.qrA
534- 669 (126.70/25.91) LPETSSTSLDSTAESGHANGA.....................DWQeeiyqkikvmketyLPEineMYQ.RIAT.KLQ...QHD...P..................LP.....QQPK..SEQL...E..KLKVL......K.....VMLERL.....ITFLQV......SKNN.I...TPNfkeklgfyekQIVGFLNPSRYRKP..........IPNLQQG.....QP..P..QPRIQP...M
670- 794 (126.48/25.85) ..QQPQSQV.PQLQSHENQLI....................pQLQ..............SMN...TQG.SVPQmQQN...NMSsllH..................NSLSTLSGDST..SQSN...M..MNPIQ......PGSNLDSGQGNA.....LSSLQQtpvgsvQKNL.VsisQPT..........KVNT...LSTQSGASM....LQ...............P..NIPLQSNSN...M
795- 891 (137.75/29.04) IQHQH...LKQQQQQ.....H.....................EQQ..............MLQ...TQQ.LKRL.QQH...QNL...M..................QNQQ.MQQQQL..HQQA...P..SPMPG......DSDKPVSGISS.....................L.L...NTG..........NI........VHQPSV....AQApAPSLAIG.....TP...GI..SASP...L
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