<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22921
Description |
ATP-dependent DNA helicase |
Sequence | MEHYQATCTPQPAISKFPPITPTADQNSFIRPEEISVPPELCSNCSHGFKLGLCPEAAKHLQEMKDMLIAVSNDLLDNAAELSQAQIDKLRQDRLQLNKQIQQLEKYLRDEERQKSHFSASTLVRNLQYETPQSAACKIDPMRFDAQVHLRNDLNGYEKWNAPSVSFSSIDSFGVSSVPLEREPYIPSFVEVNYIEGSNDPKWSSTNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALVCPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTEQQEILRELCSDYCKYRLLYVTPEKVAKSDVLLRNLESLNGRGLLARIVIDEAHCVSQWGHDFRPDYKELGILKKKFEKTPVLALTATATASVKEDVVQALGLVDCIVFRQSFNRPNLWYSVIPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQECGHKTAFYHGNMDAAQRSFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMIIQGQAEQSPWTAGCGRNNMKSSDRILEKNTENLLRMVSYSENDVDCRRLLQLLHFGEKFDAGNCGNTCDNCSKIKTLVERDVTESAKQLVELVKLTGQHFSSSHILEVYRGSLSQFVKRHRHENLSLHGAGKHLAKGEASRILRHLVIEDFLAEDVKKSDFYGSVSSVLKVNESKAHKLCSGGQRIVLRFPSSVKASKQGKSEATPAKGSLMSGKLSPPQAGSPAQPQSEVDLNLSAKLFSALRMLRTALLKEAGDGVMAYHIFGNATLQHMSKRIPRTKEELLEINGIGKAKVSKYGDRVLETIESTIREYNKGDRNSSGSNESSDSIKRRRDASKALNGNMEEEDEFTKSTGRSKKRTATRQNKGSEVHNSMEPVSCNQFLDDDLDFKDSYHDLEADA |
Length | 962 |
Position | Unknown |
Organism | Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.504 |
Instability index | 48.97 |
Isoelectric point | 8.01 |
Molecular weight | 108208.69 |
Publications | PubMed=16973872
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Function
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:InterPro
ATP binding GO:0005524 IEA:UniProtKB-KW
hydrolase activity GO:0016787 IEA:UniProtKB-KW
nucleic acid binding GO:0003676 IEA:InterPro
|
GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro
DNA repair GO:0006281 IEA:InterPro
DNA replication GO:0006260 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP22921
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 75.61| 24| 208| 553| 598| 3
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553- 577 (40.97/55.31) SDY.IRVKHMIiQGQAEQSPWTAG.CG
602- 627 (34.64/ 9.24) SENdVDCRRLL.QLLHFGEKFDAGnCG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.81| 18| 18| 432| 449| 4
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432- 449 (34.27/24.11) CLEDIDKFIKENHFDECG
453- 470 (33.54/23.42) CLSRMDCEKVAEKLQECG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.64| 18| 134| 215| 233| 5
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215- 233 (29.71/19.71) EANNKKVFGnHSFRPNQRE
355- 372 (37.93/21.09) EAHCVSQWG.HDFRPDYKE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.86| 27| 30| 806| 834| 9
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806- 832 (46.54/42.19) RMLRT..ALLKEAGDGVMAYHIFGNATLQ
837- 865 (40.32/26.64) RIPRTkeELLEINGIGKAKVSKYGDRVLE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.62| 17| 17| 883| 899| 11
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883- 899 (27.61/15.80) GSNESSDSIKRRRDASK
903- 919 (29.00/16.94) GNMEEEDEFTKSTGRSK
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