<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22873

Description Uncharacterized protein
SequenceMATQEEAVVPESSQSSDPPITIGLAVSSSKSTKYAVKWALKNFSARERTRFMLIHVRQKVTLVPTPMGNYVPVDQVRDDIASAYEKEVECEAQNMLLMYKNMCNGKVEAEVLVVKGDDVAETISGVVSACQIHKLVVGVSSQGNFMRKSKGNRTSSQICKSVPSFCMVYAVSKGGLSMVYSPGSEGDNSSEIFQVNESSNSELYSDDKSSVSDITPSRISGSNLPGGNLDSSSSAEHNRPRSLQEYLTESTLTAIVDKDQSGSPCGADQITESSNLPISDKSPTVSRALQELMRSDDKASAPCAGHISAPTNLPVSNKAASVKSALQELMLSEDKANTPCASDQISGSSNLPITDKATTVSNALQELMLSEDKANVNFEREKLKIKLGHMRGVCKLVEDESTSASQQMIDLIEKRAQEEARLVEVHSRINTAIEAARKEREQRYAAEAQARHVRDLANEEALKKQHAQLMASREADDMQKLEKLLELGDKPYIMFTWEEMESATSSFSEALKIGSGANGTVYKGKIHQTTVAIKLLKSDDSRVTKHFKQELEVLSKTRHRHLLLLLGACLDRACLVYEYMENGSLEDRLQCKGGTSPLPWYYRFRIAWEIALALIYLHSSRPKPIIHRDLKPANILLDSNFTSKIGDAGIATLLPLSEASSTHTIRKHTDLVGTLFYMDPEYQRSGQVSAKSDVYALGMVFLQLLTAKSPMGLADIVERAVEERRLVDILDQRAGKWPVKAAYELAQLGLNCLEMRGKNRPDLKSNVLVVLERLNKIASTARDSVRPVPTAPPSHFICPILKRVMQDPCIASDGYSYERVAIEMWLHENDVSPLTKTQLPDKNLVPNHALLCAINSWKGEAGAGGITG
Length868
PositionTail
OrganismPanicum miliaceum (Proso millet) (Broomcorn millet)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum.
Aromaticity0.05
Grand average of hydropathy-0.344
Instability index41.82
Isoelectric point6.39
Molecular weight95396.54
Publications
PubMed=30683860

Function

Annotated function Functions as an E3 ubiquitin ligase. 
ECO:0000256	ARBA:ARBA00003861
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22873
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     115.06|      13|      14|     308|     320|       1
---------------------------------------------------------------------------
  234-  246 (17.70/ 7.51)	S.AEHNRPRSLQEY
  271-  283 (18.66/ 8.31)	T.ESSNLPISDKSP
  308-  320 (21.40/10.58)	S.APTNLPVSNKAA
  324-  336 (21.14/10.36)	S.ALQELMLSEDKA
  346-  358 (19.43/ 8.94)	S.GSSNLPITDKAT
  361-  374 (16.74/ 6.71)	SnALQELMLSEDKA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.65|      27|      34|     128|     161|       2
---------------------------------------------------------------------------
  128-  158 (42.43/41.55)	SACqihkLVVGVSSQGNFMRKSKGNR..TSSQI
  164-  192 (44.21/23.91)	SFC....MVYAVSKGGLSMVYSPGSEgdNSSEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.10|      11|      38|     259|     270|       3
---------------------------------------------------------------------------
  259-  270 (18.12/15.92)	DQSGSPCgADQI
  297-  307 (20.98/12.62)	DKASAPC.AGHI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.51|      33|      38|     398|     435|       4
---------------------------------------------------------------------------
  398-  435 (44.07/44.10)	EDESTSASQ....QMIDLiekrAQEEArLVEVHSRINTAIEA
  439-  475 (49.45/32.87)	EREQRYAAEaqarHVRDL....ANEEA.LKKQHAQLMASREA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.53|      30|     724|      57|      86|       6
---------------------------------------------------------------------------
   57-   86 (55.87/37.72)	RQKVTLVPT.PMGNYV.PV.DQVRDD..IAS...AYEK
  782-  819 (34.66/20.63)	RDSVRPVPTaPPSHFIcPIlKRVMQDpcIASdgySYER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     155.17|      51|      79|     484|     538|       7
---------------------------------------------------------------------------
  484-  538 (80.89/60.36)	LLELG...DKPYIMFTWEEmesaTSSFSEALKIGSGANGTV..YKGKIH.QTTVAIKLLKS
  563-  619 (74.29/46.45)	LLLLGaclDRACLVYEYME....NGSLEDRLQCKGGTSPLPwyYRFRIAwEIALALIYLHS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22873 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DKDQSGSPCGADQITESSNLPISDKSPTVSRALQELMRSDDKASAPCAGHISAPTNLPVSNKA
2) ITPSRISGSNLPGGNLDSSSSAEHNRPRSLQEYLTESTLTAI
257
214
319
255










Molecular Recognition Features






MoRF SequenceStartStop




NANANA