<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22865
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGELGQQTVELGAVVRRAAEESYLALRELVEKSQAEAEGKGIGAGANGGWQRSDTEKKIDLLKFITRTRQRMLRLHVLAKWCQQVPLVHYCQQLGSTLNSHETCFTQTADWLFFMRDDLEKRRAPMFDVPSATEVMLTGVYQRLPRCIEDIGSQNKLSPDEEKRALRKLDASVRYKVLVTPRPKEVSNVSVTDGIAVFRVDGEFKVLLTLGYRGNVDLWRILHMELLVGEKKGPIKLDESRRFALGDDIERRMAASDNPFTVLYAILHEFCISLAMDTIIRQANVLRQGRWKDAIRSELISDSATGQTGNASLMQLVQDGEFDSTGFKIPGLKVNYWLDGKSTSTAEPDSSPFIRIEAGQEMQIKCQHSSFVLDPFTDKEANLSLDLSCIDVEQLILRAIACNRHTRLLNIQRQLCRNVQISQSPKDVILKRDVAAAKDTNKNAAKKGFSDCFGNEVLQGILPAIQEKTLCKTDQVYQQSQGTLRIPETILHGSDLMVMGFPHCANAYYLLMQLDKDFRPVFHLLETQCDASDKTKTNANADAKEAIRCNKINVGQMQVLKNESNTNPFDVKLQALQSILSSTDLMESDIPVQNGIEPLPLLPACSPSFSSIVDEVFEYECGSTAAQNHSLPPSSLSSTSHLNSLSVGIQGINPRAVSPMHDGGGSHTQAINTLKVHPSVSLHSYLPSNFRHIQDVNKSLQLVPSSNNNSNQIPVRSSHSGILGNAVSNHLVRPSTTTGGLEKLITAGSDGASRKRSLSDFLPTYNTVEADSIQKLVSDLRRLSNARSFACGMRRLIGVKVDDKVDDNELSTEMKPQSVNKSNSDASEKLSEQMRKTFRIEAVGLMSLWFSYGTMPMVHIVVEWEIAKGGCTMHVSPDQLWPHTKFLEDFVNGGEVASFLDCIRLTAGPLLALGGAIRPARMPVTVSSGYSTMPKQGNIPTQGLLSNGSSSSTIHHAPVPSNAAAAHLGSHNLHAAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLSCPQFRPFIMEHVAQGLNALEPNFMNATQASVHLNNNSGAPQTAPGASRLSATPGVSMSRPTSGVANHVAASLSRAGNAMLASSALSSGIGGASVRLTPGAGLPVHMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKDNEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQSNAQEELAAAEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGFSQAHGDIATAQRARIELCLENHSGSVSADNTESSLAKSNIHHDRAHSSVEFALTFVLDHALIPQMNVAGGAAWLPYCISVRLRYSFGDNYHIIFLAMDGSHGGRACWLQLEEWERCKQKVARAVETVNGSAVAGEVGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS |
Length | 1500 |
Position | Tail |
Organism | Panicum miliaceum (Proso millet) (Broomcorn millet) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Panicinae> Panicum.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.179 |
Instability index | 46.19 |
Isoelectric point | 8.12 |
Molecular weight | 163747.02 |
Publications | PubMed=30683860
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP22865
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 327.93| 94| 185| 905| 1010| 1
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651- 707 (58.27/27.20) QGINPRAvSPMHDGGGSHTqaINTLKVhPSVSLHSYLPSNFRHIQD....VNKSL.....QLVPSS...........................................................................
937- 1065 (135.75/97.28) QGNIPTQ.GLLSNGSSSST..IHHAPV.PSNAAAAHLGSHNLHAAA....MLSAAGRGGPGLVPSSLLPFDVsvvlrGPYWIriiyrkkfsvdmrcfagdqvwlqpatPPKGGP..S..VGGSLSCPQFRPfimeHVAQGL
1071- 1172 (133.91/82.95) NFMNATQ.ASVHLNNNSGA..PQTAPG.ASRLSATPGVSMSRPTSGvanhVAASLSRAGNAMLASSALSSGI.....GGASV..........................RLTPGAglPvhMKGELNTAFIGL....GDDGGY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 164.32| 53| 406| 301| 359| 2
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301- 359 (82.62/63.14) ISDSATGQTGNASLMQLVQDGefDSTGfkipGLK..VNYWLDGKSTSTAEPDSSP.FIRIEA
716- 771 (81.70/47.36) VRSSHSGILGNAVSNHLVRPS..TTTG....GLEklITAGSDGASRKRSLSDFLPtYNTVEA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.82| 29| 129| 114| 149| 3
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114- 149 (46.99/49.25) FFMRDDLEKRRApmfdvpsATEVMLTGVYQRLPR.CI
244- 273 (48.82/32.60) FALGDDIERRMA.......ASDNPFTVLYAILHEfCI
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