<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22830

Description U-box domain-containing protein 57-like
SequenceMEADERAEAARRAKEAGNDAYRKSFLETAVEHYTRGELLDPSDISFLTNRAAAYLKLCKYKECVRDCDDAVRRGRELGTENKLLAKALSRKASALLELAECAGDYAPAIRALEQSLAEYYCEETLDKLGEAERKRKDVEEQERLDQEAADHDREKGNEFFKQKKYHEAAMYYTRAMKISPKDPRAFSNRAQCHIYLGDFPQGLEDAERCVELDPTFLKGYLRKAKVQFLMESYENSLATYLEGLRCDPNNLEVIDGLRRCAACIKRANGSDFELKEFKEMSGNFQSENDLRKFEKAMEQAAIFKKEASDERLMRIESERMARTMEEHLSGLHQELERLKKQHAEVMEKLEKANEHIQGQLSESRGQYEQLLSEHDHLLHERNHAVREVQELRQKRGQMLSVLVTSMHCEFSSSELECATENFSSSLKIGEGGFGCVYRGTLRNMTVAIKVLKPDNLHGQSQFEQEVAILSRVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLVCAEKRRSLPWQTRIQIIAEICSALTFLHKNKPHPVVHGDLKPANILLDVNLVSKLSDFGISRHLLQSSTNNTTMYRTMHPMGTLQYMDPEFFATGELTCQSDVYSFGIVVLRLLTGKPPDGIKKIVEDAMMKGDLNSIVDTLAGEWPDVYAQQLAHLALSCTETSRKCRPDLSVVVWGVVEAMRDAATIPSVPSASSSRSVSDENCTPSYFICPIFQDVMNDPHIAADGFTYEAEAIRSWLDGGHDTSPMTNMRLEHDELIPNRALRSAIQEWLQQQNMAL
Length786
PositionTail
OrganismPanicum miliaceum (Proso millet) (Broomcorn millet)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum.
Aromaticity0.07
Grand average of hydropathy-0.505
Instability index43.04
Isoelectric point5.57
Molecular weight89155.08
Publications
PubMed=30683860

Function

Annotated function 
GO - Cellular Component
plasma membrane	GO:0005886	IEA:UniProtKB-SubCell
plastid	GO:0009536	IEA:UniProtKB-KW
thylakoid	GO:0009579	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22830
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     123.91|      28|      85|      13|      40|       1
---------------------------------------------------------------------------
   13-   40 (46.66/28.26)	AKEAGNDAYRKSFLETAVEHYTRGELLD
   99-  126 (45.51/27.39)	AECAGDYAPAIRALEQSLAEYYCEETLD
  152-  174 (31.73/16.95)	DREKGNEFFKQKKYHEAAMYYTR.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     333.83|      83|      92|     181|     265|       3
---------------------------------------------------------------------------
  181-  265 (132.13/82.01)	KDPRAFS.NRAQCHIYLGDFPQGLEDAE..RCV.ELDPTFLKgyLRKAKVQFLMESYENSLATYLEGLRCDPNN....LEVIDGLRRCAACIK
  275-  357 (115.44/65.47)	KEFKEMS.GNFQSENDLRKFEKAMEQAAifKKE.ASDERLMR..IESERMARTMEEHLSGLHQELERLK..KQH....AEVMEKLEKANEHIQ
  359-  436 (86.26/47.11)	....QLSeSRGQYEQLLSEHDHLLHERN..HAVrEVQELRQK...RGQMLSVLVTSMHCEFSS..SELECATENfsssLKIGEG...GFGCV.
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22830 with Med32 domain of Kingdom Viridiplantae
Unable to open file!