<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22801
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAVELGQQTVELGAVVRRAAEESYLALRELVEKSQAEAEGKGIGAGANGGWQRSDTEKKIDLLKFITRTRQRMLRLHVLAKWCQQVPLVHYCQQLGSTLSSHETCFTQTADWLFFMRDDLEKLRAPMFDVPSATEVMLTGGYQRLPRCIEDIGSQNKLSPDEQKRALRKLDASVRYKVLVTPRPKEVSNVSVTHGIAVLRVDGEFKVLLTLGYRGNVDLWRILHMELLVGEKKGPIKLDESRRFALGDDIERRMAASDNPFTVLYAILHEFCISLAMDTIIRQANVLRQGRWKDAIRSELISDSATGQTGNASLMQLVQDGEFDSSGFKIPGLKVNYWLDGKSTSTAEPDSSPFIKIEAGQEMQIKCQHSSFVLDPFTDKEANLSLDLSCIDVEQLILWAIACNRHTRLLTIQRQLCKNVQISQSPKDVILKRDVAAAKDTNKNAGKKGFSDCFGNEVLQVRAYGQAYISLGINIRSGRFLLQSPENILPPAALTDCEETLNKGSTSATEIFQQSQGTLKIPETILHGSDLMVMGFPHCANAYYLLMQLDKDFRPVFHLLETQCDASDKTKTNANADAKEVIRCNKINVGQMQVLKNESNTNPFDVKLQALQSIMSSTDLMESDIPVQNGIEPLPLLPACSPSFSSIVDEVFEYECGSTAAHNHSVPPSSLPSTSHLNSLSVGIQGINPRAVSPMHDGGGSHTQAINTLKVHPSVSLHSYLPSNFRHIQDINKSLQLVPSSNNNSNQIPVQSSHSGILGNSVSNHLVRPSTTTGGLEKLITAGSDGASRKRSLSDFLPSIPSLQGLQPSEPRKRRKISQSVKSPLPLPAYSSNLQSRASLTCGDVHEERNNCVPATIYASVLLHVIRHCSLCIKHAQLTAQMDSLAIPYVEEVGLRTPSSTLWLRLPFAQDDSWKHICLHLGKAGSMSWDVRINDPHFRELWELNGGSTMTQWGVGIRIANTSEMDSHISFDSDGVVLTYNIVEADSVQKLVSDLRRLSNARSFACGMRRLIGVKVDDKVDDNQLSTEMKPQSVNKSNSDASEKLSEQMRKMFRIEAVGLMSLWFSYGTMPMVHIVVEWEIAKGGCTMHVSPDQLWPHTKFLEDFVNGGQVASFLDCIRLTAGPLLALGGAIRPARMPVTVSSGYSTMPKQANIPTQGPLANGSSSSTIHHAPVPSNAAAAHLGSHNLHAAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNALEPNFMNATQASVHLNNNAGAPQTAPGASRLSATPGVSMSRPTSGVANHVAASLSRAGNAMLASSALASGIGGASVRLTPGAGLPVHMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKDNEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQSNAQEELAAAEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGFSQAHGDIATAQRARIELCLENHSGSVSADNAESSLAKSNIHHDRAHSSVEFALTFVLDHALIPHMNVAGGAAWLPYCISVRLRYSFGDNNHIAFLAMDGSHGGRACWLQLEWERCKQKVARAVETVNGSAVAGEVGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS |
Length | 1713 |
Position | Tail |
Organism | Panicum miliaceum (Proso millet) (Broomcorn millet) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Panicinae> Panicum.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.164 |
Instability index | 49.06 |
Isoelectric point | 8.15 |
Molecular weight | 186998.50 |
Publications | PubMed=30683860
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP22801
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 515.22| 137| 394| 1107| 1247| 1
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1107- 1247 (224.03/153.87) NGGQVASFLDCIRLTAGPLLALGGAIRPARMPvtVSSGYSTMPK.QANIPTQGpLAN..GSSSSTIHHAPVPSNAAAAHLGSHNLHAAAMLSaAGRGGPGLVPSSLLPFDVSVVLRGPY...WIRIIYRKKFSVDMRCFAGD................QVWLQ
1276- 1412 (197.62/122.44) AQGLNALEPNFMNATQASVHLNNNAGAPQTAP..GASRLSATPGvSMSRPTSG.VANhvAASLSRAGNAMLASSALASGIGG....ASVRLT.PGAGLPVHMKGELNTAFIGLGDDGGYgggWVPLAALKKVLRGILKYLG.................VLWL.
1562- 1652 (93.57/52.56) ......................................................LEN..HSGSVSADNA..ESSLAKSNIHHDRAHSSVEFA.....LTFVLDHALIP.HMNVA.GGAA...W..LPY..CISVRLRYSFGDnnhiaflamdgshggrACWLQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 145.05| 48| 393| 123| 238| 2
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165- 220 (68.18/130.42) RALRKLDAsVRYKVLVTPRPKEVSNVSVTHgiavLRVDGEFKvllTLGYR..G.NVDLW
288- 338 (76.87/21.94) RQGRWKDA.IRSELISDSATGQTGNASLMQ....LVQDGEFD...SSGFKipGlKVNYW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 92.55| 26| 27| 702| 727| 3
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702- 727 (46.64/27.24) HTQAIN.TL......KVHPSVSLHS.YLPSNFRH
729- 754 (25.12/11.11) ..QDINkSL......QLVPSSNNNSnQIPVQSSH
772- 799 (20.79/ 7.87) TTGGLE.KLitagsdGASRKRSLSD.FLPS....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 83.24| 25| 55| 613| 638| 9
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613- 638 (39.89/29.41) SIMSSTDLMESDIPVQnGIEPLPLLP
670- 694 (43.35/27.08) SLPSTSHLNSLSVGIQ.GINPRAVSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 73.59| 22| 23| 911| 933| 11
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911- 933 (36.26/25.92) DDSWKHIcLHLGKAGSMS.WDVRI
935- 957 (37.33/20.93) DPHFREL.WELNGGSTMTqWGVGI
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