<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22778

Description U-box domain-containing protein 35-like isoform X2
SequenceMGRSYLDMKDAALDLGYPLVAVCIDKDKNSQNALKWAIDSLVQKGQTLVLVHVNTKGHSGGVEDSAGFKQPTDPHMKDLFLPFRCFCTRKDIQCKDVVLDEPDVAKSIIEFVAHAAVEKLVLGATGRGGFVRFKADIPTTISKGAPDFCTVYIVNKGKVSSQRNAIRTAPRVSPLRSVIQSQAQSLAAPKPEPPSQRWSSSSRGTDPSETPRVDNFRSPFARGGTGNTRKSYADLSHMSMPDSADISFVSSTGRRSIDQHSAIPPRMSNCSADSYDHSFEMRTPSKWGGDSFGGMDHTTFSQTSSSSFCSLGTDDVEAEMKRLRLELKQTMDMYSAACKEALTAKQKAMELQRWKMEEEQKTHDSRITEDSAMAMIEREKARAKAAMEAAEASQRIAEMEVQKRITAEKKLLKEAEERKSRGGGMSHEVRYRRYTIEEIEQGTDRFNDARKVGEGGYGPVYKGFLDHTQVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMASGSLDDCLFRRAGGPVIPWQHRFRICAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSFGVMLLQIITAKPPMGLTHHVGRAMERGALHDMLDPAVLDWPLEEAQCLAEMALRCCELRRKDRPDLGTVVLPELNRLRALGEDNMQYCGAIRGGGGGGMYSSPFYSNVSRSHAAEMMSDSSQYPRSVFSSRAGDSPMPPRRSNV
Length779
PositionTail
OrganismPanicum miliaceum (Proso millet) (Broomcorn millet)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Panicinae> Panicum.
Aromaticity0.07
Grand average of hydropathy-0.455
Instability index52.26
Isoelectric point8.29
Molecular weight86295.30
Publications
PubMed=30683860

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22778
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.95|      34|     167|     510|     548|       2
---------------------------------------------------------------------------
  510-  548 (61.60/47.40)	EYGCLvyeymASGSLDDCLFRRAGGP.....VIPWQHRFRICAE
  679-  717 (56.34/32.27)	EAQCL.....AEMALRCCELRRKDRPdlgtvVLPELNRLRALGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     138.37|      33|      37|     250|     282|       3
---------------------------------------------------------------------------
  197-  241 (29.32/15.92)	.RWSS..SSRGT.DPSETPRvdnfrspfarGGTGntRKSyAD.lSHMSMP
  242-  264 (26.08/13.21)	..........DSADISF............vSSTG..RRS.ID..QHSAIP
  265-  301 (50.55/33.72)	PRMSN..CSADSYDHSFEMR........tpSKWG..GDS.FGgmDHTTFS
  302-  336 (32.42/18.52)	QTSSSsfCSLGTDDVEAEMK........rlRLEL..KQT.MD..MYSA..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.49|      33|      39|     349|     387|       4
---------------------------------------------------------------------------
  349-  386 (45.24/43.02)	MELQRWKMEEEQKthdsRITEDSAMaMIEREKARAKAA
  391-  423 (50.25/32.49)	EASQRIAEMEVQK....RITAEKKL.LKEAEERKSRGG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22778 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AMELQRWKMEEEQKTHDSRITEDSAMAMIEREKARAKAAMEAAEASQRIAEM
2) SADISFVSSTGRRSIDQHSAIPPRMSNCSADSY
3) SVIQSQAQSLAAPKPEPPSQRWSSSSRGTDPSETPRVDNFRSPFARGGTGNTRKSYADLSH
348
243
177
399
275
237










Molecular Recognition Features






MoRF SequenceStartStop




NANANA