<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22747
Description |
Putative RNA polymerase II holoenzyme cyclin-like subunit |
Sequence | MAASYWESSQRRFWTFSREQLDNVRQKLEEEDQNLVQSYPLPELRHLSFYFNQQIARLGKRLGVRQQAMATAQLYLRRFYTKVEIRRTNPYLVIATAVYLAYFFSSDTSKLGECEFFLISEMSSQMIVHHPYRTLTSLQGNFSLTQEESALAWSIINDHYMTDLPLLYAPHIIAVMAILLALVLRPNTTGIQSASNSASNIATAAQAALNSASQPRPATGDRQSGPRTKVQKLANWLAESNIDIEGIVNCTQEMISFYEFQEQYNEKHTREQINRFVKARGLDK |
Length | 284 |
Position | Kinase |
Organism | Coleophoma cylindrospora |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes>
Helotiales> Dermateaceae> Coleophoma.
|
Aromaticity | 0.11 |
Grand average of hydropathy | -0.352 |
Instability index | 59.88 |
Isoelectric point | 8.45 |
Molecular weight | 32620.61 |
Publications | PubMed=30018880
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | cyclin-dependent protein serine/threonine kinase regulator activity GO:0016538 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP22747
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 37.92| 11| 23| 69| 80| 1
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69- 80 (17.74/15.44) MATAqLYLRRFY
94- 104 (20.18/11.72) IATA.VYLAYFF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 75.17| 23| 25| 108| 132| 2
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108- 132 (37.75/22.94) TSKLGecEFFLISEMSS..QMIVHHPY
136- 160 (37.42/17.15) TSLQG..NFSLTQEESAlaWSIINDHY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 103.86| 30| 33| 4| 33| 3
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4- 33 (52.58/29.53) SYWESSQRRFWTFSREQLDNVRQKLEEEDQ
38- 67 (51.28/28.66) SYPLPELRHLSFYFNQQIARLGKRLGVRQQ
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