<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22733

Description Uncharacterized protein
SequenceMASSGDPLAVAVAVRGDGRASRRAARWAAAAPGRVALVHVIPPLAFVPTPTGEQVPVERMAAGVVEIFSQDRRARAQDVFLPFRRLFGSKTVETVVLEGHSVAEALARYAAESGVHNLVLGSATLSCFRRILWLQDLPHAVLKAMPCSCNVFIVSRHRLTIKLANQTQTDNSNTCSKIQSVSHRAFALQLRSQLQDKQSLHDLPDVNTPKSSGVSSSDSCSQARSSLSNSTSAAQSSESHRRRLFGSLCRKTPGRTGDTDFDATGQLKEFPYVSLSSTEESQRIDEVAKPRKELQDKPMMCVKACENHVQAKKKIQVLSNGCSEDLHKVQDALQWENFFKQKAAPENNKHFRAIEEAEMVKEAFTREAYSKHNAETVTNMATTEKAKVLDALLSTGKSCRRYSRHEIELATENFSDAKKIGEGGYGIVYRCILDHTEVAVKVIQQDSRGKIDEFFKEIDILSRLHHPHLVLLLGFCPEIGCLVYEYMENGSLEDQLIDNEGRQPLHWFLRFQIIFEVARGLAFLHGTKPEPIVHRDLKPGNILLDKNYVSKIGDVGFAKLISDLAPDGFTEYRDDTVIAGTMYYMDPEYQLTGTVRPKSDLFALGIIILQLLTGKRPQGLILSTEEAIRKGTFPEILDVSLNDWPIAEAEMLAKLGLHCTALRCRDRPDLEQEVLPELENVLSRVTSSWKFESPKAVVPSHFICPISQEVMDDPCVAADGHTYERRAIEAWLEEHKISPITKHMLPSLTIIPSHSLHEAIQQWKQSSR
Length768
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy-0.302
Instability index51.24
Isoelectric point6.73
Molecular weight85702.80
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22733
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     160.74|      48|      50|     568|     617|       1
---------------------------------------------------------------------------
  544-  566 (19.38/ 6.45)	.................LDKN...Y.....VSKIGDVgFA.......KLISDLAP
  568-  617 (73.64/54.50)	GFTEYRDDTVIAGTmYyMDPE...YQLTGTVRPKSDL.FA.LGIIILQLLTGKRP
  619-  668 (67.71/40.81)	GLILSTEEAIRKGT.F...PEildVSLNDWPIAEAEM.LAkLGLHCTALRCRDRP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     148.57|      46|      51|     441|     490|       2
---------------------------------------------------------------------------
  441-  490 (66.23/71.98)	KVIQQDSRGKIDEFFKeIDILSRLHHPhLVLLLGFCPEIgcLVYEYMENG
  495-  540 (82.34/65.67)	QLIDNEGRQPLHWFLR.FQIIFEVARG.LAFLHGTKPEP..IVHRDLKPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     125.66|      40|      43|     172|     213|       3
---------------------------------------------------------------------------
  172-  213 (60.72/52.51)	SNTCSKIQS.VSHRAFALQlRSQLQDKQSLHDLPDvNTPKSSG
  217-  257 (64.94/46.16)	SDSCSQARSsLSNSTSAAQ.SSESHRRRLFGSLCR.KTPGRTG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.18|      22|      44|     684|     705|       4
---------------------------------------------------------------------------
  684-  705 (43.57/31.43)	RVTSSWKFE...SP..KAVVPSHFICP
  726-  752 (31.61/20.75)	RAIEAWLEEhkiSPitKHMLPSLTIIP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22733 with Med32 domain of Kingdom Viridiplantae
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