<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22732

Description Uncharacterized protein
SequenceMDTNWRPIQGSDPAAGGDSPPPDQAIGAPIWIQPQARTRIVNKISEALKRHLPVSAVSHPDGLNKLQQIAVRFEQRIYDAATSQSDYFRKISLKMLVMGTKTQQAPGNDQVIPNQNNSGVNQTSKMQNRHQRPSLQRHQPNITLQPQQQHAQQPAMGLMQPRSQPNQLQESQQHIMSQFQAQPNQLKKQLGMHQQFSMQQRVQTSGGMLLQQNNMDQKNVFIQAQKGLQEASSSTSADFTAQSGHAGARDWQEDIYQMIQSLKDQYFAELIELFNKISVKLHHVDSIIPRQKPSEQYDRMKSFKIMLDRILQVLQMSKSTIQPAMRDKIPQYEKQIITILNSQRKPVQPQVQQQLQPPPGK
Length361
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.839
Instability index61.82
Isoelectric point9.93
Molecular weight41123.28
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22732
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.91|      15|      16|     164|     179|       1
---------------------------------------------------------------------------
  158-  177 (17.76/ 7.70)	LMqprsQPNQLQEsQQHIMS
  178-  194 (21.15/ 6.08)	QF..qaQPNQLKK.QLGMHQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.89|      17|      17|     320|     336|       3
---------------------------------------------------------------------------
  320-  336 (30.76/13.06)	TIQPAMRDKI.PQYEKQI
  338-  355 (25.13/ 9.61)	TILNSQRKPVqPQVQQQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.40|      15|      18|     121|     135|       5
---------------------------------------------------------------------------
  121-  135 (27.99/13.84)	NQTSKMQNRH.QRPSL
  141-  156 (24.42/11.06)	NITLQPQQQHaQQPAM
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22732 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MDTNWRPIQGSDPAAGGDSPPPDQAIGAPIWI
2) MGTKTQQAPGNDQVIPNQNNSGVNQTSKMQNRHQRPSLQRHQPNITLQPQQQHAQQPAMGLMQPRSQPNQLQESQQHIMSQFQAQPNQLKKQLGMHQQFSMQQRVQTSGGMLL
1
98
32
210










Molecular Recognition Features






MoRF SequenceStartStop




NANANA