<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22731

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAGAGGVDPGAPPPPAGGDWRAGLQPDARARIVNKITETLKKHLPASAPDGVNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAAGNAQVIPNQNNSTPGLPSEGSNQAQPSAIPLMSQQQARQPNTTSVQASSLTNIGQNLPGVNQTSTMQNVSVMPQNTMNNGLAQGTSQDIYAAQRQMAGRQQQQQSQQLIYQQQQMLMKQKLQQNSLMQPHIQQQQSLLQPTQMQSTQQSMMQMSSGLHPVQSTVPQTQPMSRQSVTQSGIQQNQLNSVQQSVPSLLQQPQQSVGRQQQQQAQPSMHQQPSLQRQQPNIPLQQQQQQQLMGQQPNLERNQLIGQQNGAVEMQQQQRLPAQSNNLLNVQQTQQQMLNQQSMPLHQPQQLGSQANMSSLQQQQQNQQQQRMHMLQMKAQQTQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAQRGLQEVSSSTSADSTTQTGLAGQAPNSSILQQQQTSQNLQQHDSHTNPQASLSSMSTGLQSSGVAGMQHVPVPPTTNFSAPTQQNGANIQHQPVSNLEAAQGGNFNSLQHGSVSGALQQGNTGPMQGTVNTQPQTSSGMLSHNSMSTMQPNGNSMQANASSLQQLKQQQQDHHMMQSQQMKRQMFQQYQQKQQMLQQQFPIQQQLQKQQQVQMQVPQLHAGNDVNESKARQGTAVKPGVYQQHLGQRSNYYHQQLKQGGAFPISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLNSANSPYVPSPSPSVAPSPIPVDSDKPHSNISSLTNTGQTGHQQTSLAPQTQSIAVNTPGISASPLLAEFTSVDGSQANMPTQVPTKSDAAERPMDRLLKALRTTQRESLNAAVSDIRSVVSMMDRIAGSAPGNGSRTAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDISAMPLNVSSAGSVDDSFKQTFSVDTPDLQSTATSRAKRRKIEVNHALLEEIEEINQGLIDTELRVCEDDDESLIATSEGTVIKCTYTAVAVSPSLKSMLASAHTSPIMPLRLLVPAGYPKCSPVLLDKFLDEQRNSDDLSSQAKSKFGVLLRGLDEPMSLREIARTWDACARGAIAEYAQKSGGGSFSSSYGRWETCVV
Length1187
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.804
Instability index71.63
Isoelectric point9.17
Molecular weight129758.12
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22731
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.69|      22|      22|     297|     318|       2
---------------------------------------------------------------------------
  297-  318 (44.99/14.30)	QQSVPSLL.QQPQQSVGRQ......QQQQ
  324-  345 (30.96/ 6.73)	HQQ.PSLQrQQPNIPLQQQ......QQQQ
  394-  418 (31.74/ 7.16)	QQSMP..L.HQPQQ.LGSQanmsslQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     153.41|      37|      37|     473|     509|       3
---------------------------------------------------------------------------
  442-  492 (38.47/ 7.64)	AQ.QPPMglmqpqsqhnqlqqsqqhLMSQ......fqsQPNQ....L....QQQLGMQQQSSMQQ.R
  493-  525 (35.16/ 6.15)	LQTSGGM..................LLQQNNMDQQ............kqfiQAQRGLQEVSSS....
  649-  682 (42.45/ 9.44)	PQTSSGM...................LSHNSMSTM...QPNG....N....SMQ...ANASSLQQlK
  683-  726 (37.32/ 7.13)	QQQQDHH..................MMQSQQMKRQmfqQYQQkqqmL....QQQFPIQQQLQKQQ.Q
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.50|      18|      18|     194|     211|       4
---------------------------------------------------------------------------
  194-  211 (28.44/ 7.90)	SQDIYAAQRQMAGRQQQQ
  371-  388 (26.05/ 6.40)	QQRLPAQSNNLLNVQQTQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      89.01|      20|      20|     606|     625|       6
---------------------------------------------------------------------------
  557-  576 (31.17/11.48)	QHDSHTNPQASLSSMSTGLQ
  606-  623 (26.60/ 8.53)	QHQPVSNLEAAQGGNFNS..
  625-  642 (31.25/11.53)	QHGSVSG..ALQQGNTGPMQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     145.54|      46|      55|     776|     828|       7
---------------------------------------------------------------------------
  728-  753 (34.86/10.33)	.............................QMQ.VPQ...L.HAGNDVNE..................SKARQGTAVK...........P
  776-  828 (75.69/44.38)	AfP.............ISSPQNL......QAS.SPQ...ISHHSPQVDQHNLL.............PSQVKTGTPLNSANSPyvpspsP
  831-  909 (34.99/ 9.38)	A.PspipvdsdkphsnISSLTNTgqtghqQTSlAPQtqsIAVNTPGISASPLLaeftsvdgsqanmPTQVPTKS..DAAERP.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      90.23|      20|      20|     110|     129|       8
---------------------------------------------------------------------------
  110-  129 (35.15/13.55)	NAQV..IPNQNNSTPGLPSEGS
  131-  152 (26.59/ 8.28)	QAQPsaIPLMSQQQARQPNTTS
  154-  173 (28.48/ 9.44)	QASS..LTNIGQNLPGVNQTST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.37|      14|     123|      86|     106|       9
---------------------------------------------------------------------------
   68-   85 (16.77/16.51)	LQKIAVRF...EEKiytaATN
   90-  106 (17.60/14.23)	LRKISLKMlsmETK....TQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.62|      11|      15|     269|     279|      12
---------------------------------------------------------------------------
  269-  279 (20.95/ 8.61)	QSTVPQTQPMS
  285-  295 (19.67/ 7.57)	QSGIQQNQLNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.14|      20|      48|     939|     958|      14
---------------------------------------------------------------------------
  910-  931 (28.01/15.21)	MDRLlkALRTTQRESLNAAVSD
  939-  958 (35.13/20.90)	MDRI..AGSAPGNGSRTAVGED
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.01|      15|     412|     174|     188|      15
---------------------------------------------------------------------------
  174-  188 (30.06/14.82)	MQNVSVMPQN.....TMNNG
  583-  602 (24.95/10.97)	MQHVPVPPTTnfsapTQQNG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22731 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MDANWRPTQGSDPAAGAGGVDPGAPPPPAGGDWRAGLQPDARARIVNKITETLKKHLPASAPDGVNEL
2) NSVQQSVPSLLQQPQQSVGRQQQQQAQPSMHQQPSLQRQQPNIPLQQQQQQQLMGQQPNLERNQLIGQQNGAVEMQQQQRLPAQSNNLLNVQQTQQQMLNQQSMPLHQPQQLGSQANMSSLQQQQQNQQQQRMHMLQMKAQQTQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAQRGLQEVSSSTSADSTTQTGLAGQAPNSSILQQQQTSQNLQQHDSHTNPQASLSSMSTGLQSSGVAGMQHVPVPPTTNFSAPTQQNGANIQHQPVSNLEAAQGGNFNSLQHGSVSGALQQGNTGPMQGTVNTQPQTSSGMLSHNSMSTMQPNGNSMQANASSLQQLKQQQQDHHMMQSQQMKRQMFQQYQQKQQ
3) PLLAEFTSVDGSQANMPTQVPTKSDAAERPMDRLLKALRTTQR
4) QKLQQNSLMQPHIQQQQSLLQPTQMQSTQQSMMQMSSGLHPVQSTVPQTQPMSRQSVTQSGIQQNQ
5) QQQFPIQQQLQKQQQVQMQVPQLHAGNDVNESKARQGTAVKPGVYQQHLGQRSNYYHQQLKQGGAFPISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLNSANSPYVPSPSPSVAPSPIPVDSDKPHSNISSLTNTGQTGHQQTSLAPQTQSIAVNTPGI
6) RKISLKMLSMETKTQQAAGNAQVIPNQNNSTPGLPSEGSNQAQPSAIPLMSQQQARQPNTTSVQASSLTNIGQNLPGVNQTSTMQNVSVMPQNTMNNGLAQGTSQDIYAAQRQMAG
1
294
880
227
712
91
68
709
922
292
876
206










Molecular Recognition Features






MoRF SequenceStartStop




1) RAGLQPDARARIVN
34
47