<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22729

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAAAAGVDPNAPPAAGGDWRAQLQPEARSRIVNKIMETLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAPGNAQVIPNQNNSAHGLPQGSNQAQTSVVPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLAQGTSQDIYAAQRQMAGRQQQQQSQQLIYHQQQMLMKQKLQQNSLMQPHIQQQQSLLQPTQMQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQLNSVQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSPQPNINLQQQHQQLMGQQPNVQQNQLIGQQNGTMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSMPLHQPQQLGSQSNMSSPQQQQQNQQLQQLLGTVPNVSNMQRIHMLQTKVQQPQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQPHRGLQEVSSSTSADSAQTGHAGAGDWQEEIYQMIKSLKDQYFAELSELFNKISVKLQHVDSIIPPQKPSEQYDRMKSFKIMLERILQMLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSFQQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNELKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSANSPFVPSPSPSIAPSPIPVDSAKPHSNISSLTNTGQAGHQQTSLVPQTQSIAVNTPGISASPLLAEFTSVDGSQANMLTQAPTKSSAVERPLDRLLKALRTTQRESLNAAVSDIRSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDTSAMPLNVSSAGSVNDSFKQTFSVDTPDLQSTATSQAKWQKIEVTHALLEEIQEINQQLIDTELHVCEDDAESFAGTCEGAEGTVIKCTFTAVAVSPSLKSIFASAQMSPIMPLRLLVPASYPKCSPVLLDKSPDEQRNSEDLSMKAKSKFSILLRGLAEPMSLREIARTWDACARKTIAEYAQKTGGGSFSSSYGCWENCVGA
Length1313
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.751
Instability index70.36
Isoelectric point9.24
Molecular weight144526.38
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22729
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     871.81|     105|     105|     165|     269|       2
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  100-  163 (74.41/12.88)	........ETKTQQapgN.A..QVIPnQ....NNSA.........H.GLPQ...GSNQ.........AQ..........TSVVPL.....M..............................S...............QQQ.......AR.......................QPNSSTS...............VQAS.SLA..N.IGQN
  165-  269 (200.44/48.66)	PG...VN.QTSTMQ...N.A..SVMP.Q....NTMN.........N.GLAQ...GTSQ..DIYA...AQRQMAGRQQQQQSQQLIYHQQQML........MKQ..............KL..Q..Q.NSLM..QPHIQQQQ.......SLL......................QPTQMQSS....Q......QSMMQMS.SGL..H.PGQS
  271-  375 (116.89/24.94)	VP...QT.QPMAMQ...S.AtqSGIQ.Q....NQLN.........S...VQ...QSVQ..SLLQ...QPQQSVGRQQQQAQPSM..HQQPSLqspqpninLQQ..............QH..Q..Q...LMgqQPNVQQNQ.......LIG......................Q...........Q......NGTMEMQ.QQQ..RlPVQS
  379-  499 (100.21/20.21)	LN...VQ.QTQQML...N.Q..TSMP......................LHQ.....PQ..QL.G...SQSNMSSPQQQQQNQQL....QQLLgtvpnvsnM.Q..............RI..HmlQ.TKVQ..QP..QQQQhaqqppmGLMqpqsqhnqlqqsqqhlmsqfqsQPNQLQ......Q......QLGMQQS.S.......MQQ
  505-  622 (70.67/11.82)	GG...M.................LLQ.Q....NNMDqqkqfiqphR.GLQEvssSTSA..D..S...AQTGHAG...AGDWQEEIYQMIKSL........KDQyfaelselfnkisvKL..Q..HvDSII..PP....QK.......PSE......................QYDRMKSF....KimleriLQMLQISkSTI..Q.PA..
  623-  701 (77.96/13.89)	..................................MR.........D.KVPQ...YEKQiiSILN...SQRR...KPVQPQIQQ...HFQP...........PA..............GQ..A..P.NSS......ISQQQ.......QPS......................QTLQQHDShtnpQ......ASLSSMS.TGL..Q.SSSA
  708-  781 (69.40/11.46)	PApptKNfSAPTQQ...NgA..NIQH.Q....ADSN.........L.ETAQ...G..G..NF.................NS.....................................L..Q..H.GS.V..SSALQQGS.......TV........................P..MQGT....M......NTQLQTS.SSMlsH.NS..
  783-  851 (77.06/13.63)	..........STMQ..pN.G..NSMQ.A....NASS........fQ.QLKQ....QQQ..DHQM...MQSQQMKRQMFQQYQQ....KQQM.........LQQ..............QLpvQ..Q.........HLQKQQ.................................PVQMQ................................
  852-  942 (84.77/15.82)	........................IP.QlhagNDVN.........ElKVRQ...GTAMkpGMYQqhlGQRSNYYHQQLKQSGAFPISSPQNN........LQA..............SS..P..Q.ISHH..SPQVDQHN.......PL........................PSQVKTG...................TPL..H.SANS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.14|      23|     105|    1113|    1139|       3
---------------------------------------------------------------------------
  967-  998 (29.27/12.00)	NISSltntgqAGHQQTSLvpqTQSIAVNTPGI
 1116- 1138 (40.86/24.58)	NVSS......AGSVNDSF...KQTFSVDTPDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     131.81|      41|     233|    1001|    1044|       4
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 1001- 1033 (48.66/30.20)	.........SPLLA....EFTSVD..........GSQANMLTQAPTKSSAVERPLD
 1036- 1080 (40.09/32.11)	LKALRTTQrESLNA....AVSDIRsvvsmidriaGS.......APGNGSRAAVGED
 1081- 1115 (43.06/22.60)	LVAMTKCR......lqarNFITND..........GSGASKKMKRDT..SAM..PL.
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22729 with Med15 domain of Kingdom Viridiplantae
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