<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22723

Description Uncharacterized protein
SequenceMSMEIQEEDSGETAPEMEAAGVSTVAIAVSGSRSSRHALKWALDKFVPGGRVLFRILHVRPPITMVPTPMGNYIPVSQVRDDVASAYREELEWQARNMLLPYKKMCAQRQVEAEAVLLESDDVPAAISEEIDKFNIGKLVLGSSSRSIFRRKLKGSKTATKISECIPSFCTAYVVSKGKLSFVRSATSDPCETPKTISSSTVSSPSSRSLSSAPSECADRNGAAAVLFRQSSLSSQHDHALANINRRASPSGSGGSEISYHADTTLMTNSHSIASGAQLSSSSSGDSVYKSFRRDSSPDIPDLQAAVSEIATNLKHSHDQDDLKLQIESMKVKLRHLQMLHECAHTEPVDSAQKLHNNLGIQRVEHEIKLREIDLTEEMVRRLLRRMEREEEEVAEREGQAIQSSSEQKATEGDGDHQNAGEINTGLKNAGRCLTEYNRYSWEHIQAATSSFSSDLVIGKGTYGTVYKAKFQHTVAAVKVLNSLEGFGTQQLQQEVPYLLGNTNMFFTICSLHPELEVLGKIRHPHLLLLLGACPERGCVVYEYMENGSLDDALNHRRNGTPPLAWYDRVRVAWEVATAVAFLHSARPDPIIHRDLKPANILLDRNLSSKVGDVGLSTALLHHSGAGGGGGQQQSTMVRNTTPVGTFCYIDPEYQRTGAVSAKSDVYALGVVVLQLLTGRTSPLGLAHAVETALEEDGGDSFAEMLDATAGEWPPEEARELALLAVRCAEMRRRDRPGLREHILPALERIKDVAARAARETKALLVRTASSSAAPGHFLCPILQEIMEDPCVAADGYTYDRKAIETWVSMKDKSPMTNLRLPSKSLIPNHSLRSAIMDWSSKNR
Length844
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.361
Instability index53.26
Isoelectric point6.30
Molecular weight92498.49
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22723
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     119.53|      32|      35|     127|     158|       1
---------------------------------------------------------------------------
  127-  158 (53.88/37.90)	ISEEIDKFNI......GKLVLGSSS..RS.........IFRRKLKGSKT
  162-  196 (38.99/25.23)	ISECIPSFCTayvvskGKL.....SfvRS.........ATSDPCETPKT
  214-  247 (26.67/14.76)	PSECADRNGA......AAVLFRQSS..LSsqhdhalanINRR.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.28|      11|      35|     737|     750|       2
---------------------------------------------------------------------------
  737-  750 (16.86/22.32)	PGlreHIL.PALERI
  775-  786 (18.41/12.28)	PG...HFLcPILQEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      93.93|      25|      35|     318|     342|       3
---------------------------------------------------------------------------
  299-  316 (16.17/ 8.44)	.DIPDLQAAVSEIATNLKH......
  318-  342 (41.69/35.15)	HDQDDLKLQIESMKVKLRHLQMLHE
  356-  378 (36.07/29.27)	H..NNLGIQRVEHEIKLREIDLTEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.70|      17|      34|     552|     569|       5
---------------------------------------------------------------------------
  552-  569 (29.29/22.45)	DALNHrRNGTPPLAWYDR
  589-  605 (30.41/18.19)	DPIIH.RDLKPANILLDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.37|      12|      37|     718|     729|       6
---------------------------------------------------------------------------
  718-  729 (20.64/14.55)	ARELALLAVRCA
  758-  769 (19.73/13.59)	ARETKALLVRTA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22723 with Med32 domain of Kingdom Viridiplantae
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