<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22717

Description Uncharacterized protein
SequenceMDANWRPIQGSDPAAGGDPPPPDQAIGAPIWIQPQARTRIVNKISEALKRHLPVSAVSHPDGLNQLQQIAVRFEQRIYDAATTQSDYFRTISLKMLAMETKTQQDPGNDQVIPNQNNSGVNQTSKMQNRYAMAQNAINNGLEQGTSQDIYAPQIQMVGRQQQQQSQQLIYHQHQRPSLQSQQPNITLQPQQQHAQQPAMGLMQPRSQPNQLQESQQHIMSQFQAQPNQLKKQLGMQQQFSMQQRVQTSGGMLLQQNNMDQKNIFIQAQKGLQEASSSTSADFTAQSGHAGAGDWQEDIYQMIQSLKDQYFAQLIELFNKISVKLHHVDSIIPPQKPSEQYDRMKSFKIMLDRILQMLQMSKSTIQPAMRDKIPQYEKQIITILNSQWKPVQPQIQQQLQPPPGK
Length404
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.829
Instability index64.86
Isoelectric point9.32
Molecular weight45925.39
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22717
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.98|      15|      16|     207|     222|       1
---------------------------------------------------------------------------
  207-  222 (26.14/11.20)	QPNQLQEsQQHIMSQF
  225-  239 (24.84/ 6.79)	QPNQLKK.QLGMQQQF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.55|      17|      18|     114|     131|       4
---------------------------------------------------------------------------
  114-  131 (26.39/19.19)	NQNNSGVNQTSKmQNRYA
  135-  151 (30.16/16.95)	NAINNGLEQGTS.QDIYA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.39|      21|     379|       1|      24|       6
---------------------------------------------------------------------------
    1-   24 (38.49/25.34)	MDANWRPIQgsdPAAGGD.PPPPDQ
  383-  404 (37.90/17.43)	LNSQWKPVQ...PQIQQQlQPPPGK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.76|      18|      30|     316|     333|      10
---------------------------------------------------------------------------
  316-  333 (30.99/26.32)	LFNKISVKLHHVDSIIPP
  349-  366 (30.77/26.07)	MLDRILQMLQMSKSTIQP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22717 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KMLAMETKTQQDPGNDQVIPNQNNSGVNQTSKMQNRYAMAQNAINNGLEQGT
2) MDANWRPIQGSDPAAGGDPPPPDQAIGAPIWI
3) QQQQSQQLIYHQHQRPSLQSQQPNITLQPQQQHAQQPAMGLMQPRSQPNQLQESQQHIMSQFQAQPN
94
1
161
145
32
227










Molecular Recognition Features






MoRF SequenceStartStop




NANANA