<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22715

Description Uncharacterized protein
SequenceMSQQQARQPNTTSVQASSLTNIGQNLPGVNQTSTMQNVSVMPQNTMNNGLAQGTSQDIYAAQRQMAGRQQQQQSQQLIYQQQQMLMKQKLQQNSLMQPHIQQQQSLLQPTQMQSTQQSMMQMSSGLHPVQSTVPQTQPMSRQSVTQSGIQQNQLNSVQQSVPSLLQQPQQSVGRQQQQAQPSMHQQPSLQRQQPNIPLQQQQQQQQQQLMGQQPNLERNQLIGQQNGAVEMQQQQRLPAQSNNLLNVQQTQQQMLNQQSMPLHQPQQLGSQTNMSSLQQQQQNQQQQRMHMLQMKAQQTQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQQPSMQQRLQTSGGMLLQQNNMGQQKQFIQAQRGLQEVSSSTSADSTTQTGLAGAGDWQEEIYQMIKNLKDQYFAELSDLSNKISMKLQHVDSIIPPQKPSEQYDRMKNFKTMLDRILQLLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQQFQPPAGQAPNSSILQQQQTSQNLQQHDSHTNPQASLSSMSTGLQSSGVAGIQHVPVPPTTNFSAPTQQNGANMQHQAVSNLEAAQGGNLNSLQHGSASGALQQGNAGPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSLQQLKQQQQDHHMMQSQQMKRQMFQQYQQKQQMLQQQFPIQQQLQKQQQVQMQVPQLHAGNDVNESKARQGTAVKSGIYQQHLGQRSNYYNQQLKQGVPFPISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLNSANSPYVPSPSPSVAPSPIPVDSDKQHSNISSLTNTGQTGHQQTSLAPQTQSIAVNTPGISASPLLAEFTSGDGSQANMPTQVPTKSNAAERPMDRLLKALRTTQRESLNAAVSDIRSVVSMMDRIAGSAPGNGSRTAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDISAMPLNVSSAGSVDDSFKQTFGVDTPDLQSTATSRAKRRKTEVNHALLEEIEEINQGLIDTELRVCEDDDESLAATSEGTVIKCTYTAVAVSPSLKSMLASAQTVSFRKKARAHYVVDICLFRLVGMWQSPIMPLRLLVPAGYPKCSPVLLDKFLDEQRSVATLLIH
Length1132
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.815
Instability index74.51
Isoelectric point9.59
Molecular weight125533.31
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22715
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     832.10|     122|     122|     116|     237|       1
---------------------------------------------------------------------------
    5-  106 (120.61/21.13)	..............................QAR....QPNTT...SVQASSLT.N.IG.......Q......................N.L........PGVNQ.T..STMQnvsvM....PQNTMnnGLA.....................QGT........SQDIY.AA.....QRQ.......MAG...........RQQQ......QQSQQLIYQQ...QQMLMKQKL..QQNSLMQphIQQ....QQSL
  116-  237 (231.71/48.34)	QQSM......MQMSSGLH..........PVQST....VPQTQ...PMSRQSVT.Q.SGI.....QQ......................NQL........NSVQQ.SVPSLLQ....Q....PQQSV..GRQ.....................QQQ........AQPSM.HQQ.PSLQRQ.......QPN........IPLQQQQ......QQQQQQLMGQ...QPNLERNQLIGQQNGAVE..MQQ....QQRL
  238-  356 (138.57/25.53)	..........PAQSNNLL..........NVQQT......QQQ...MLNQQSMP.L.H.......QP......................QQL........GS.QT.NMSS.LQ....Q....QQQN.....Q.....................QQQrmhmlqmkAQQTQ.QQQ....HAQ.......QPP........MGLMQPQsqhnqlQQSQQHLMSQfqsQPN....QL.QQQLG.....MQQqpsmQQRL
  366-  538 (119.82/20.94)	QNNMgqqkqfIQAQRGLQ..........EVSSS.............TSADSTT.Q.TGLagagdWQeeiyqmiknlkdqyfaelsdlsNKI........SMKLQ.HVDSII..........PPQKP..SEQydrmknfktmldrilqllqisKST........IQPAM.RDKvPQYEKQiisilnsQRR........KPVQPQI......QQQFQPPAGQ...APN...SSILQQQQTSQN..LQQ....HDSH
  542-  692 (148.59/27.98)	QASL......SSMSTGLQssgvagiqhvPVPPTtnfsAPTQQngaNMQHQAVS.NlEAA.....QG......................GNL........NSLQHgSASGALQ....QgnagPMQGT..MNT.....................QLQ........TSSSM.LSH.NSMSTM.......QPNgnsmqanaSSLQQLK......QQQQDHHMMQ...SQQMKR.QMFQQYQQKQQ..MLQ....QQ.F
  702-  785 (72.81/ 9.42)	QQVQ......MQVPQ.LH..........A.GND....V..NE...SKARQGTAvK.SGI.....YQ......................QHLgqrsnyynQQLKQ.GVPFPIS....S....PQ.......N.....................LQA........SSPQIsHHS.P..QVD.......QHN........L.LPSQ...................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      97.28|      27|      29|     833|     859|       2
---------------------------------------------------------------------------
  792-  819 (33.83/13.77)	LNSAnSPYV.....PS.PSPSVAPS..PIPVDSDKQ
  820-  851 (37.14/15.87)	HSNI.SSLTntgqtGH.QQTSLAPQ..TQSIAVNTP
  852-  886 (26.31/ 9.00)	GISA.SPLLaeftsGDgSQANMPTQvpTKSNAAERP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.21|      15|      28|     925|     939|       3
---------------------------------------------------------------------------
  925-  939 (25.51/19.71)	GNGSRTAVGEDLVAM
  954-  968 (25.70/19.91)	GSGASKKMKRDISAM
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22715 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GQRSNYYNQQLKQGVPFPISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLNSANSPYVPSPSPSVAPSPIPVDSDKQHSNISSLTNTGQTGHQQTSLAPQTQSIAVNTPGISASPLLAEFTSGDGSQANMPTQVPTKSNAAERPMDRLLKALRTTQRESLNAAVSD
2) MSQQQARQPNTTSVQASSLTNIGQNLPGVNQTSTMQNVSVMPQNTMNNGLAQGTSQDIYAAQRQMAG
3) NSVQQSVPSLLQQPQQSVGRQQQQAQPSMHQQPSLQRQQPNIPLQQQQQQQQQQLMGQQPNLERNQLIGQQNGAVEMQQQQRLPAQSNNLLNVQQTQQQMLNQQSMPLHQPQQLGSQTNMSSLQQQQQNQQQQRMHMLQMKAQQTQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQQPSMQQRLQTSGGMLLQQNNMGQ
4) PVQPQIQQQFQPPAGQAPNSSILQQQQTSQNLQQHDSHTNPQASLSSMSTGLQSSGVAGIQHVPVPPTTNFSAPTQQNGANMQHQAVSNLEAAQGGNLNSLQHGSASGALQQGNAGPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSLQQLKQQQQDHHMMQSQQMKRQMFQQYQQKQQ
5) QKLQQNSLMQPHIQQQQSLLQPTQMQSTQQSMMQMSSGLHPVQSTVPQTQPMSRQSVTQSGIQQNQ
6) QQQFPIQQQLQKQQQVQMQVPQLHAGNDVNESKARQGTAVKSGIYQQH
738
1
155
501
88
689
908
67
371
686
153
736










Molecular Recognition Features






MoRF SequenceStartStop




NANANA