<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22712

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAGVGGVDPGAPPPPAGGDWRAGLQPDARARIVSKITETLKKHLPASAPDGVNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAAGSAQVIPNQNNSTPGLPSEGSNQAQPSAIPLMSQQQARQPNTTSVQASSLTNIGQNLPGVNQTSTMQNVSVMPQNTMNNGLAQGTSQDIYAAQRQMAGRQQQQQSQQLIYQQQQMLMKQKLQQNSLMQPHIQQQQSLLQPTQMQSTQQSMMQMSSGLHPVQSTVPQTQPMSRQSVTQSGIQQNQLNSVQQSVPSLLQQPQQSVGRQQQQAQPSMHQQPSLQRQQPNIPLQQQQQQQQQQLMGQQPNLERNQLIGQQNGAVEMQQQQRLPAQSNNLLNVQQTQQQMLNQQSMPLHQPQQLGSQTNMSSLQQQQQNQQQQRMHMLQMKAQQTQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQQPSMQQRLQTSGGMLLQQNNMGQQKQFIQAQRGLQEVSSSTSADSTTQTGLAGAGDWQEEIYQMIKNLKDQYFAELSDLSNKISMKLQHVDSIIPPQKPSEQYDRMKNFKTMLDRILQLLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQQFQPPAGQAPNSSILQQQQTSQNLQQHDSHTNPQASLSSMSTGLQSSGVAGIQHVPVPPTTNFSAPTQQNGANMQHQAVSNLEAAQGGNLNSLQHGSASGALQQGNAGPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSLQQLKQQQQDHHMMQSQQMKRQMFQQYQQKQQMLQQQFPIQQQLQKQQQVQMQVPQLHAGNDVNESKARQGTAVKSGIYQQHLGQRSNYYNQQLKQGVPFPISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLNSANSPYVPSPSPSVAPSPIPVDSDKQHSNISSLTNTGQTGHQQTSLAPQTQSIAVNTPGISASPLLAEFTSGDGSQANMPTQVPTKSNAAERPMDRLLKALRTTQRESLNAAVSDIRSVVSMMDRIAGSAPGNGSRTAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDISAMPLNVSSAGSVDDSFKQTFGVDTPDLQSTATSRAKRRKTEVNHALLEEIEEINQGLIDTELRVCEDDDESLAATSEGTVIKCTYTAVAVSPSLKSMLASAQTSPIMPLRLLVPAGYPKCSPVLLDKFLDEQRNSDDLSSKAKSKFGVLLRGLDEPMSLREIARTWDACARGAIAEYAQKSGGGSFSSSYGRWETCVV
Length1303
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.807
Instability index70.02
Isoelectric point9.38
Molecular weight143284.65
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22712
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            11|     797.81|      74|      76|     337|     410|       1
---------------------------------------------------------------------------
  139-  215 (76.50/17.70)	LMSQQQA.......RQPNTTSV...Q....ASS....LTN..I....GQNlpgvNQTST..M.Q.N.V..SVM.PQ.NTmNN..GLA...Q........................GT..SQDIY..............aAQR.QMAGRQ......QQQQ..SQQ
  216-  289 (77.47/18.05)	LIYQQQQmlmkqklQQNSLM.....Q....PHI....QQQQSL....LQ.......PTQ..M.Q.StQ..QSM.MQ.MS.SG..LHPV..Q........................STvpQTQPM...............SRQ.SVT...........QS..GIQ
  290-  331 (50.32/ 8.25)	......................................QNQLN....SVQ....QSVPS..L.L.Q.Q......PQ.QS........V..G........................RQ..QQQ.................AQP.SM..HQ......QPSL..QRQ
  337-  410 (141.55/41.19)	LQQQQQQ.......QQQQLMGQ...Q....PNL....ERNQLI....GQQ....NGAVE..M.Q.Q.Q..QRL.PA.QS.NN..LLNV..Q........................QT..QQQML...............NQQ.SMPLHQ......PQQL..GSQ
  416-  460 (63.32/12.94)	LQQQQQ........................................................nQ.Q.Q..QRM........H..MLQMkaQ........................QT..QQQQH...............AQQpPMGLMQ......PQSQ..HNQ
  461-  502 (56.83/10.60)	L....QQ.......SQQHLMSQfqsQ....P........NQL.....................Q.Q.Q.................LGM..Q........................Q........................QP.SM..QQ......RLQTsgGML
  503-  589 (62.67/12.71)	LQQNNMG.......QQKQFIQA...Q....RGL.......QEV....SSS....TSA.D..S.T.T.Q..TGL.AG.AG.D......W..Q........................EE..IYQMIknlkdqyfaelsdlsNKI.SMKLQHvdsiipPQKP..SEQ
  607-  684 (71.05/15.73)	LQISKST.......IQPAMRDK...V....PQY....EK.QIIsilnSQR....RKPVQpqI.Q.Q.Q..FQP.PAgQA.PNssILQQ..Q........................QT..SQNL.................QQ.HDSHTN......PQ....ASL
  687-  788 (64.04/13.20)	M..STGL.......QSSGVAGI...QhvpvPPT....TNFSAP....TQQ....NGA.N..M.Q.H.QavSNLeAA.QG.GN..LNSL..QhgsasgalqqgnagpmqgtmntqlQT..SSSML...............SHN.SMSTMQ......PNGN..SMQ
  794-  834 (63.35/12.95)	LQQLKQQ.......QQDHHMMQ.........................SQQ....MKR.Q..M.F.Q.Q..Y............................................QQ..KQQML...............QQQ..FPIQ................
  835-  904 (70.70/15.60)	..QQLQK.......QQQVQM.Q...V....PQLhagnDVNESK....ARQ....GTAVK..S.GiY.Q..QHL.GQ.RS..N..YYN...Q........................QL..KQGV....................PFPISS......PQNL..QAS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.46|      22|      57|     916|     937|       2
---------------------------------------------------------------------------
  916-  937 (39.99/21.30)	DQHNLLP..SQVKTGTPLNSANSP
  974-  996 (28.28/12.38)	QQTSLAPqtQSIAVNTPGISA.SP
 1007- 1025 (30.19/13.84)	SQAN.MP..TQVPTKS..NAAERP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.31|      10|      19|       7|      16|       3
---------------------------------------------------------------------------
    7-   16 (20.02/10.16)	PTQGSDPAAG
   27-   36 (22.29/12.24)	PPAGGDWRAG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.14|      20|      42|    1055|    1074|       4
---------------------------------------------------------------------------
 1026- 1047 (28.01/17.34)	MDRLlkALRTTQRESLNAAVSD
 1055- 1074 (35.13/23.80)	MDRI..AGSAPGNGSRTAVGED
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.05|      19|      19|      56|      74|       5
---------------------------------------------------------------------------
   56-   74 (30.18/19.71)	HLPASAPDGVNELQKIAVR
   78-   96 (27.87/17.58)	KIYTAATNQSDYLRKISLK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.50|      19|     276|     939|     959|       7
---------------------------------------------------------------------------
  939-  959 (31.79/24.08)	VPSPSPSVapSPIPVDS..DKQH
 1218- 1238 (31.70/17.01)	VPAGYPKC..SPVLLDKflDEQR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22712 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GQRSNYYNQQLKQGVPFPISSPQNLQASSPQISHHSPQVDQHNLLPSQVKTGTPLNSANSPYVPSPSPSVAPSPIPVDSDKQHSNISSLTNTGQTGHQQTSLAPQTQSIAVNTPGISASPLLAEFTSGDGSQANMPTQVPTKSNAAERPMDRLLKALRTTQRESLNAAVSD
2) MDANWRPTQGSDPAAGVGGVDPGAPPPPAGGDWRAGLQPDARARIVSKITETLKKHLPASAPDGVNEL
3) NSVQQSVPSLLQQPQQSVGRQQQQAQPSMHQQPSLQRQQPNIPLQQQQQQQQQQLMGQQPNLERNQLIGQQNGAVEMQQQQRLPAQSNNLLNVQQTQQQMLNQQSMPLHQPQQLGSQTNMSSLQQQQQNQQQQRMHMLQMKAQQTQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQQPSMQQRLQTSGGMLLQQNNMGQ
4) PVQPQIQQQFQPPAGQAPNSSILQQQQTSQNLQQHDSHTNPQASLSSMSTGLQSSGVAGIQHVPVPPTTNFSAPTQQNGANMQHQAVSNLEAAQGGNLNSLQHGSASGALQQGNAGPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSLQQLKQQQQDHHMMQSQQMKRQMFQQYQQKQQ
5) QKLQQNSLMQPHIQQQQSLLQPTQMQSTQQSMMQMSSGLHPVQSTVPQTQPMSRQSVTQSGIQQNQ
6) QQQFPIQQQLQKQQQVQMQVPQLHAGNDVNESKARQGTAVKSGIYQQH
7) TQQAAGSAQVIPNQNNSTPGLPSEGSNQAQPSAIPLMSQQQARQPNTTSVQASSLTNIGQNLPGVNQTSTMQNVSVMPQNTMNNGLAQGTSQDIYAAQRQMAG
877
1
294
640
227
828
104
1047
68
510
825
292
875
206










Molecular Recognition Features






MoRF SequenceStartStop




1) AGLQPDARARIVSK
35
48