<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22711

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAAAAGVDPNAPPAAGADWRAQLQPEARSRIVNKIMETLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAPGNAQVIPNQNNSAHGLPPQGSNQAQTSVIPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLAQGTSQDIYAVQRQMAGRQQQQQSQQLIYHQQQMLMKQKLQQNALMQPHIQQQQSLLQPTQMQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQLNSVQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSLQPNIPLQQQHQQLMGQQPNVQQNQLIGQQNGAMEMQQQQRLPVQSNNLLSVQQTQQMLNQTSTPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQPQQQQHAQQPPMGLMQPQSQHNLPQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLPEVSSSTSADSTAQTGHAGAGDWQEEIYQMIKSLKDQYFAELSELFNKISVKLQHVDSIIPPQKPSEQYDRMKSFKIMLERILQMLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGAMNTQLQTSSSMLSHNSVSTMQPNGNSMQANASSFQQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNELKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSANSPFVPSPSPSIAPSPIPVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIAVNTPGISASPLLAEFTSVDGSQANMPTQAPTKSSAVERPLDRLLKALRTTQRESLNAAVSDIRSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDTSAMPLNVSSAGSVNDSFKQTFSVDTPDLQSTATSQAKWQKIEVNHALLEEIQEINQQLIDTELHVCEDDAESFAGTCEGAEGTVIKCTFTAVAVSPSLKSIFASAQMSPIMPLRLLVPASYPKCSPVLLDKFPDEQRNSEDLSMKAKSKFSILLRGLAEPMSLREIARTWDACARKTIAEYAQKTGGGSFSSSYGCWESCVGA
Length1315
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.737
Instability index69.59
Isoelectric point9.20
Molecular weight144618.54
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22711
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.73|      15|      21|     306|     326|       1
---------------------------------------------------------------------------
  298-  323 (21.64/ 8.19)	QsvqsllqQPQQsvgrQQQQAQPSMH
  444-  458 (30.09/ 6.18)	Q.......QPQQ....QQHAQQPPMG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.79|      17|      21|     802|     822|       4
---------------------------------------------------------------------------
  211-  229 (21.68/ 6.09)	Q....qsQQLIYHQQ..QMLMKQKL
  795-  819 (23.12/ 6.71)	QanassfQQLKQQQQdhQMMQSQQM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     332.30|      60|      65|      84|     143|       5
---------------------------------------------------------------------------
   84-  141 (95.39/28.94)	........N.QSDYLRKISLKMLSMETKTQQAPG........NAQVIPNQNNSAHGLPP.............QGS.......NQ..AQT.....SVIPLMS...................Q
  142-  206 (58.36/14.14)	QQ..arqpN.SST.....SVQASSLANIGQNLPGvnqtstmqNASVMP.QNTMNNGLA..............QGT.......SQ..DIY.....AVQRQMA...................G
  257-  305 (41.50/ 7.40)	....................SMMQMSSGLH..PG........QSTVPQTQPMAMQSATQ.............SGI.......QQ..NQLnsvqqSVQSLLQ....................
  348-  416 (47.08/ 9.64)	QP......NvQQNQL..IGQQNGAMEMQQQQR..............LPVQSNNL..LSV.............QQT.......QQmlNQT.....ST.PL..hqpqqlgsqsnmsslqqqqQ
  643-  687 (42.19/ 7.68)	QRrkpvqpQ.IQQHFQ..........PPAGQAPN........SS..ISQQQQ.....PS.............QTL.......QQ..HDS.....HTNP.......................
  821-  882 (47.78/ 9.91)	RQ......M.FQQYQQKQ..QM..L...QQQLPV........QQHLQKQQPVQMQ.IPQlhagndvnelkvrQGTamkpgmyQQ..H..................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.17|      14|      15|     747|     760|       6
---------------------------------------------------------------------------
  493-  506 (24.22/ 7.59)	MQQSSMQQRLQTSG
  747-  760 (22.95/ 6.66)	LQHGSVSSALQQGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     277.58|      55|      82|     896|     950|       7
---------------------------------------------------------------------------
  542-  594 (35.67/10.80)	QTGHAGAG.DWQ.EEIYQMIKSLKDqyfaelselfNKI......SVkL..QHVDsiIPPQKPS.......................
  688-  739 (54.01/20.64)	...........Q.ASLSSMSTGLQS..........SSA......AG.I..QHVP..APPTKNFSAPTqqnganiqHQADSNL.ETA
  896-  950 (98.62/44.59)	QSGAFPIS.SPQ.NNLQASSPQISH..........HSP......QV.D..QHNP..LPSQVKTGTPL........HSANSPFVPSP
  952-  977 (32.25/ 8.96)	....................PSIA...........................PSP..IP..VDSDKP.........HSNISSLTNTG
  978- 1033 (57.03/22.27)	QAGHQQTSlVPQtQSIAVNTPGIS...........ASPllaeftSV.DgsQAN...MPTQ....APT........KS..SA.VERP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22711 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ISLKMLSMETKTQQAPGNAQVIPNQNNSAHGLPPQGSNQAQTSVIPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLAQGTSQDIYAVQRQMAG
2) MDANWRPTQGSDPAAAAAGVDPNAPPAAGADWRAQLQPEAR
3) PLLAEFTSVDGSQANMPTQAPTKSSAVERPLDRLLKALRTT
4) QKLQQNALMQPHIQQQQSLLQPTQMQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQ
5) QRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGAMNTQLQTSSSMLSHNSVSTMQPNGNSMQANASSFQQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNELKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSANSPFVPSPSPSIAPSPIPVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIAV
6) QSLLQQPQQSVGRQQQQAQPSMHQQPSLQSLQPNIPLQQQHQQLMGQQPNVQQNQLIGQQNGAMEMQQQQRLPVQSNNLLSVQQTQQMLNQTSTPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQPQQQQHAQQPPMGLMQPQSQHNLPQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLPEVSSSTSADSTAQTGHAGAGD
92
1
1004
227
643
301
206
41
1044
292
995
550










Molecular Recognition Features






MoRF SequenceStartStop




NANANA