<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22710

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAAAAGVDPNAPPAAGADWRAQLQPEARSRIVNKIMETLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAPGNAQVIPNQNNSAHGLPPQGSNQAQTSVIPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLAQGTSQDIYAVQRQMAGRQQQQQSQQLIYHQQQMLMKQKLQQNALMQPHIQQQQSLLQPTQMQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQLNSVQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSLQPNIPLQQQHQQLMGQQPNVQQNQLIGQQNGAMEMQQQQRLPVQSNNLLSVQQTQQMLNQTSTPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQPQQQQHAQQPPMGLMQPQSQHNLPQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLPEVSSSTSADSTAQTGHAGAGDWQEEIYQMIKSLKDQYFAELSELFNKISVKLQHVDSIIPPQKPSEQYDRMKSFKIMLERILQMLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGAMNTQLQTSSSMLSHNSVSTMQPNGNSMQANASSFQQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNELKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSANSPFVPSPSPSIAPSPIPVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIAVNTPGISASPLLAEFTSVDGSQANMPTQAPTKSSAVERPLDRLLKARESLNAAVSDIRSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDTSAMPLNVSSAGSVNDSFKQTFSVDTPDLQSTATSQAKWQKIEVNHALLEEIQEINQQLIDTELHVCEDDAESFAGTCEGAEGTVIKCTFTAVAVSPSLKSIFASAQMSPIMPLRLLVPASYPKCSPVLLDKFPDEQRNSEDLSMKAKSKFSILLRGLAEPMSLREIARTWDACARKTIAEYAQKTGGGSFSSSYGCWESCVGA
Length1310
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.735
Instability index69.73
Isoelectric point9.16
Molecular weight144018.86
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22710
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.93|      18|      21|     306|     326|       2
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  306-  326 (30.33/12.35)	QPQqsVGRQQQQaQPSMHQQP
  332-  349 (31.60/ 6.29)	QPN..IPLQQQH.QQLMGQQP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     223.93|      52|      75|     404|     455|       6
---------------------------------------------------------------------------
  410-  485 (76.12/18.53)	SLQQQQQNQQPQQLLGTVPNVSNMQ.RMHMLQTKVQQ.PQQQ..QHAQQPpmglmqpqsqhnlpqqsqqhlmsqfqSQPN..
  620-  666 (50.94/ 9.53)	TIQPAMRDKVP.QYEKQIISILNSQ.R.....RKPVQ.PQIQ..QHF.QP........................paGQAPNS
  667-  718 (51.11/ 9.59)	SISQQ...QQPSQTLQQHDSHTNPQaSLSSMSTGLQS.SSAAgiQHVPAP..........................PTKNFS
  746-  799 (45.77/ 7.68)	SLQHGSVSSALQQ.GSTVPMQGAMN.T.Q.LQTSSSMlSHNS..VSTMQP......................ngnsMQANAS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      29.75|      12|      27|     914|     940|       8
---------------------------------------------------------------------------
  914-  933 (10.41/ 7.44)	PQIShhspQVDQHNPlpsqV
  982-  993 (19.34/ 7.27)	QQTS....LVPQTQS....I
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     109.79|      27|      27|     231|     257|       9
---------------------------------------------------------------------------
  132-  156 (35.60/ 8.94)	QTSVI.PLMSQQQA.RQPNSSTSVQAS
  163-  184 (30.18/ 6.32)	QN...LPGVNQTSTMQNASVM..PQNT
  232-  257 (44.01/13.01)	.NALMQPHIQQQQSLLQPTQMQSSQQS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     203.91|      40|     105|     259|     299|      10
---------------------------------------------------------------------------
  259-  295 (53.37/20.86)	....MQMSSGL...HpGQSTVPQTQPMAMQ.SATQ..SGIQ..QNQLNS
  352-  381 (43.97/12.81)	....QQ..........NQLIGQQNGAMEMQ.QQQR..LPVQ..SNNLLS
  498-  520 (30.72/ 6.18)	MQQRLQTSGGM........LLQQNN.MDQQ.KQ................
  840-  867 (39.53/10.59)	VQQHLQ...............KQ.QPVQMQiPQLH..AGND..VNEL.K
  868-  909 (36.32/ 8.98)	VRQGTAMKPGMyqqH....LGQRSNYYHQQ.LKQSgaFPISspQNNL..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     137.92|      29|     105|    1001|    1029|      13
---------------------------------------------------------------------------
  955-  978 (33.13/14.35)	APSPI......PVDSD.KPHSNISSLT.NTGQ
 1001- 1029 (46.49/23.17)	SASPL.LAEFTSVDGS.QANMPTQAPT.KSSA
 1043- 1070 (30.54/12.64)	SLNAA.VSDIRSVVSM.IDRIAGSAPG.NGS.
 1108- 1139 (27.76/10.81)	SAMPLnVSSAGSVNDSfKQTFSVDTPDlQSTA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     196.19|      56|     516|       9|      66|      15
---------------------------------------------------------------------------
    9-   66 (92.68/52.58)	QGSDPAAAAAGVDPNAPPA.AGA.DWraQLQPEARSRIVN.KIM.ETLKKHLPVSVPEGLNE
  526-  576 (70.08/34.31)	RGLPEVSSSTSADSTAQTGhAGAgDW....QEE.....IY.QMI.KSLKDQYFAELSELFNK
  582-  617 (33.43/12.55)	.........QHVDSIIPP..........QKPSEQYDRMKSfKIMlERILQMLQIS.......
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22710 with Med15 domain of Kingdom Viridiplantae
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