<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22708

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAAAAGVDPNAPPAAGADWRAQLQPEARSRIVNKIMETLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAPGNAQVIPNQNNSGVNQTSTMQNASVMPQNTMNNGLAQGTSQDIYAVQRQMAGRQQQQQSQQLIYHQQQMLMKQKLQQNALMQPHIQQQQSLLQPTQMQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQLNSVQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSLQPNIPLQQQHQQLMGQQPNVQQNQLIGQQNGAMEMQQQQRLPVQSNNLLSVQQTQQMLNQTSTPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQPQQQQHAQQPPMGLMQPQSQHNLPQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLPEVSSSTSADSTAQTGHAGAGDWQEEIYQMIKSLKDQYFAELSELFNKISVKLQHVDSIIPPQKPSEQYDRMKSFKIMLERILQMLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGAMNTQLQTSSSMLSHNSVSTMQPNGNSMQANASSFQQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNELKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSANSPFVPSPSPSIAPSPIPVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIAVNTPGISASPLLAEFTSVDGSQANMPTQAPTKSSAVERPLDRLLKALRTTQRESLNAAVSDIRSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDTSAMPLNVSSAGSVNDSFKQTFSVDTPDLQSTATSQAKWQKIEVNHALLEEIQEINQQLIDTELHVCEDDAESFAGTCEGAEGTVIKCTFTAVAVSPSLKSIFASAQMSPIMPLRLLVPASYPKCSPVLLDKFPDEQRNSEDLSMKAKSKFSILLRGLAEPMSLREIARTWDACARKTIAEYAQKTGGGSFSSSYGCWESCVGA
Length1268
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.743
Instability index69.67
Isoelectric point9.16
Molecular weight139796.29
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22708
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     111.63|      24|      25|     238|     261|       1
---------------------------------------------------------------------------
  238-  261 (44.32/11.68)	QSGIQQNQLNSVQQSVQSLLQQPQ
  301-  323 (33.14/ 6.69)	QPNVQQNQLIG.QQNGAMEMQQQQ
  354-  374 (34.16/ 7.15)	QLGSQSN.MSSLQQQQQN..QQPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     142.02|      37|      38|     865|     901|       2
---------------------------------------------------------------------------
  158-  201 (38.91/ 6.18)	AGRQQQQQSQQLiyhQQQMLMKQKLQQnalmQPHIQQQQSLLQP
  620-  653 (42.43/ 7.49)	SISQQQQPSQTL...QQHD...SHTNP....QASLSSMSTGLQS
  865-  901 (60.68/14.29)	SSPQISHHSPQV...DQHNPLPSQVKT....GTPLHSANSPFVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     106.33|      22|      22|     761|     782|       3
---------------------------------------------------------------------------
  425-  446 (32.30/ 7.42)	SQQHLMSQFQSQPNQLQQQLGM
  761-  782 (43.59/13.22)	QQDHQMMQSQQMKRQMFQQYQQ
  784-  798 (30.44/ 6.47)	QQ...MLQ.QQLP...VQQHLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      93.57|      21|      21|     109|     129|       5
---------------------------------------------------------------------------
  103-  123 (30.07/ 9.53)	TQQAPGNAQVIPNQNNSGVNQ
  209-  227 (32.52/11.20)	QSMMQMSSGLHPGQ..STVPQ
  268-  287 (30.97/10.14)	QQQAQPSMHQQP.SLQSLQPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      82.49|      21|      21|     706|     726|       6
---------------------------------------------------------------------------
  569-  595 (22.72/ 6.71)	ISKSTIQPAMrdkvpqyEKQI...ISILNS
  712-  734 (31.02/12.37)	GSTVPMQGAM.......NTQLQtsSSMLSH
  735-  756 (28.75/10.82)	NSVSTMQPNG.......NS.MQanASSFQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      80.57|      26|     201|     387|     417|       7
---------------------------------------------------------------------------
  337-  397 (19.94/ 7.24)	QTQQMLNQTSTP..LHQPQqlgsqsnmsslqqqqqnqqpqqllgtvpnvsnmQRMHMlqtkV..............................Q
  398-  447 (29.19/ 6.97)	QPQQQQHAQQPPMGLMQPQ...........................................sqhnlpqqsqqhlmsqfqsqpnqlqqqlgmQ
  448-  470 (31.44/ 6.93)	QSSMQQRLQ.TSGGM...................................llQQNNM....D..............................Q
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     177.27|      48|      70|     905|     952|       8
---------------------------------------------------------------------------
  905-  952 (83.88/45.13)	P..........................SIA............PSPIPVDS...DKPHSNISSLTNTGQ......AGHQQTSLVPQTQSIAVNTPG
  957- 1025 (53.24/25.92)	P..........................LLAeftsvdgsqanmPTQAPTKSsavERPLDRLLKALRTTQreslnaAVSDIRSVVSMIDRIAGSAPG
 1028- 1091 (40.15/17.72)	SraavgedlvamtkcrlqarnfitndgSGA............SKKMKRDT...SAMPLNVSS............AGSVNDSF...KQTFSVDTP.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     221.57|      78|     468|       9|      99|      10
---------------------------------------------------------------------------
    9-   99 (114.16/99.55)	QGSDPAAAAAGVDPNAPPA.AGA.DWraqlQPEarsriVNKIMETLKKHLpvsVPEgLNEL.QKIAVRFE..EKIYTAATNQSDYLR....KISL.KMLSM
  479-  566 (107.41/64.80)	RGLPEVSSSTSADSTAQTGhAGAgDW....QEE.....IYQMIKSLKDQY...FAE.LSELfNKISVKLQhvDSIIPPQKPSEQYDRmksfKIMLeRILQM
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22708 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MDANWRPTQGSDPAAAAAGVDPNAPPAAGADWRAQLQPEAR
2) PLLAEFTSVDGSQANMPTQAPTKSSAVERPLDRLLKALRTT
3) QKLQQNALMQPHIQQQQSLLQPTQMQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQ
4) QRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGAMNTQLQTSSSMLSHNSVSTMQPNGNSMQANASSFQQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNELKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSANSPFVPSPSPSIAPSPIPVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIAV
5) QSLLQQPQQSVGRQQQQAQPSMHQQPSLQSLQPNIPLQQQHQQLMGQQPNVQQNQLIGQQNGAMEMQQQQRLPVQSNNLLSVQQTQQMLNQTSTPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQPQQQQHAQQPPMGLMQPQSQHNLPQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLPEVSSSTSADSTAQTGHAGAGD
6) TQQAPGNAQVIPNQNNSGVNQTSTMQNASVMPQNTMNNGLAQGTSQDIYAVQRQMA
1
957
180
596
254
103
41
997
245
948
503
158










Molecular Recognition Features






MoRF SequenceStartStop




NANANA