<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22707

Description Uncharacterized protein
SequenceMASSGDPLAVAVAVRGDGRASRRAARWATAAPGRVALVHVIPPLAFVPTPTGEQVPLERMAAGVVEIFSQDRRARAQDVFLPFRRLFGSKTVETVVLEGDSVAEALARYAAESGVRNLVLGSATLSWFRRILWLQDLPNTVLKAMPCSCNVFIVSRHGLTIKLANQTQTDNSNTCSKIQSVSHRAFALQLRSQLQDKQSLHDLPDVNTPKSSGVSSSDSCSQARSSLSNSTSAAQSSESHRRRLFGSLCRKTPGRTGDTDFDAIGQLKEFPHVPLSSTEERIDEEAKQRKELQDKPMMYVEACENHVHAKKKIQVLSNGCSEDLQKVQDALQWEDFFKQKAAPEKNKHFRAIEEAEMVKEAFTRETYSKHNAETVTNMATTEKAKVLDALLSTGKSCRRYSRHEIELATENFSDAKKIGEGGYGIVYRCTLDHTEVAVKVIQQDSRGKIDEFFKEIDILSRLHHPHLVLLLGFCPEIGCLVYEYMENGSLEDQLIDNEGRQPLHWFLRFQIIFEVARGLAFLHGTKPEPIVHRDLKPGNILLDKNYVSKIGDVGFAKLISDLAPDGFTEYRDDTVIAGTMYYMDPEYQLTGTVRPKSDLFALGIIILQLLTGKRPQGLILSVEEAIRKGTFPDILDVSLNDWPIAEAEMLAKLGLHCTALRCRDRPDLEQEVLPELENVLSSVTSSRKFESPKAVVPSHFICPISQEVMDDPCVAADGHTYERRVIEAWLEEHKISPITKHVLPSLTIIPSHSLHEAIQQWKRSSR
Length766
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy-0.319
Instability index51.94
Isoelectric point6.43
Molecular weight85579.53
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22707
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.86|      30|      52|     422|     472|       1
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  424-  454 (44.81/58.99)	G.IVYRcTLDHTEVAVKVIQQDSRGKIDEFFK
  478-  508 (49.06/17.18)	GcLVYE.YMENGSLEDQLIDNEGRQPLHWFLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     135.42|      42|      42|     172|     213|       3
---------------------------------------------------------------------------
  139-  206 (59.23/41.60)	NTvlkamPCSCN.................vfivsrhgltiklanqtqtdnSNTCSK.IQSV............SHRA..FALQLR........SQLQDKQSLHDLPDV
  207-  273 (47.86/32.04)	NT.....PKSSG...................................vssSDSCSQ.ARSSlsnstsaaqsseSHRRrlFGSLCRktpgrtgdTDFDAIGQLKEFPHV
  274-  345 (28.33/15.62)	.......PLSSTeerideeakqrkelqdkpmmyveacenhvhakkkiqvlSNGCSEdLQKV............QD.....ALQWE........DFFKQKAA....PEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     128.78|      44|      49|     557|     604|       4
---------------------------------------------------------------------------
  513-  553 (38.53/21.30)	..........FEVARGLAFLHGT....KPEPIVHRDLKPgnilldKNYVSKIGdV
  557-  604 (67.64/54.07)	KLISDLAPDGFTEYRDDTVIAGTmyymDPEYQLTGTVRP......KSDLFALG.I
  608-  630 (22.61/ 8.38)	QLLTGKRPQGLILSVEEAIRKGT................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.61|      41|      62|     643|     684|       6
---------------------------------------------------------------------------
  643-  684 (65.66/51.24)	PIAEAEM....LAKLGlHCTALRCRDRPDLEQEVLPELENVLSSVT
  703-  747 (65.95/46.61)	PISQEVMddpcVAADG.HTYERRVIEAWLEEHKISPITKHVLPSLT
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22707 with Med32 domain of Kingdom Viridiplantae
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