<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22703

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAGGGGVDPNAPPPPAGGDWRAGLQPDARARIVNKITETLKKHLPASAPDGVNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAAGNAQVIPNQNNSTPGLPSEGSNQAQPSAIPLMSQQQARQPNTTSVQASSLTNIGQNLPGVNQTSTMQNVSVMPQNTMNNGLAQGTSQDIYAAQRQMAGRQQQQQSQQLIYQQQQMLMKQKLQQNSLMQPHIQQQQSLLQPTQMQSTQQSMMQMSSGLHPVQSTVPQTQPMSRQSVTQSGIQQNQLNSVQQSVPSLLQQPQQSVGRQQQQAQPSMHQQPSLQRQQPNIPLQQQQQQQQQLMGQQPNLERNQLIGQQNGAVEMQQQQRLPAQSNNLLNVQQTQQQMLNQQSMPLHQPQQLGSQANMSSLQQQQQNQQQQRMHMLQMKAQQTQQQQHAQQSPMGLMQPQSQNNQLQQSQQHLMSQFQSQPNQLQQQLGMQQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAQRGLQEVSSSTSADSTTQTGLAGAGDWQEEIYQMIKSLKDQYFAELSDLSNKISMKLQHVDSIIPPQKPSEQYDRMKNFKNMLDRILQLLQISKSTIQPAMRDKVPQYEKQIISILSSQRRKPVQPQIQQQFQPPAGQAPNSSILQQQQTSQSLQQHDSHTNPQASLSSMSTGLQSSGVAGMQHVPVPPTTNFSAPTQQNGANIQHQAVSNMEAAQGGNLNSLQHGSVSGALQQGNTGLMQGTMNTQLQTSSGMLSHNSMSTMQPNGNSMQANASSLQQLKQQQQDHHMMQSQQMKRQMFQQYQQKQQMLQQQFPIQQQSQKQQQVQMQVPQLHAGNDVNESKARQGTAVKPGIYQQHLGQRSNYYHPQLKQGGAFPISSPQNLQQSSPQISHHSPQVDQHNLLPSQVKTGTPLNSANSPYVPSPSPSVAPSPIPVDSDKQHSNISSLTNTGQTGHQQTSLAPQTQSIAVNTPGISASPLLAEFTSVDGNQANMPTQVPTKSNAAERPMDRLLKALRTTQRESLNAAVSDIRSVVSMMDRIAGSAPGNGSRTAVGEDLVAMTKCRLQARNFIANDGSGASKKMKRDISAMPLNVSSAGSVDDSFKQTFSVDTPDLQSTATSRAKRRKIEVNHALLEEIEEINQGLIDTTLRVCEDDDESPAATSEGTVIKCTYTAVAVSPSLKSMLASAQTSPIMPLRLLVPAGYPKCSPVLLDKFLDEQRNSDDLSSKAKSKFGVLLRGLEEPMSLREIARTWDACARGAIAEYAQKSGGGSFSSSYGRWETCVV
Length1302
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.810
Instability index72.49
Isoelectric point9.38
Molecular weight143220.54
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22703
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     578.77|      63|      63|     230|     292|       4
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  138-  184 (46.87/ 7.31)	.........PL...MSQ....QQA..RQP...............NTT.......S...VQASS.L.....TN.....IGQ.NLPgvnQT.STM...QNV....SV..M.....PQNT
  231-  292 (115.43/31.20)	.QN..SLMQPH...IQQ....QQS.LLQPTQM............QST.......QQSMMQMSSGL.....HP.....VQS.TVP...QT.QPMS.RQSV..TQSG..I.....QQNQ
  297-  358 (73.10/16.45)	QQSvpSLLQ......QP....QQS.V..GRQQ............QQA.......QPSMHQQPS.L.....QR.....QQP.NIP..lQQ.QQQQ.QQQLmgQQPN..L.....ERNQ
  362-  404 (65.87/13.93)	QQN..GAVE.....MQQ....QQR.L..PA..............QS.........NNLLN.................VQQ.T.....QQ.QMLN.QQSM..P.....L.....HQPQ
  485-  546 (63.64/13.15)	QQQ..SSMQQR...LQT....SGGmLLQQNNM............DQ........QKQFIQAQRGL.....QE.....VSS.S..........TS.ADST..TQTG..LagagdWQEE
  596-  663 (45.45/ 6.82)	.KN....MLDR...ILQllqiSKS.TIQPAMR............DKV.......PQYEKQIISILssqrrKP.....VQP.QIQ...QQfQPPA.GQAP..NSSI..L.....QQ..
  664-  724 (57.10/10.88)	QQT..S..QS....LQQ....HDS.HTNP.........................QASLSSMSTGL.....QSsgvagMQHvPVP...PT.TNFS.APT...QQNGanI.....QHQA
  777-  823 (54.11/ 9.83)	.....STMQPNgnsMQA....NAS.SLQQLKQ............QQQ.......DHHMM............................QS.QQMK.RQMF..QQ....Y.....QQKQ
  828-  906 (57.21/10.91)	QQF..PIQQQS...QKQ....QQV.QMQVPQLhagndvneskarQGTavkpgiyQQHLGQRSNYY.....HP......QL.KQG...GA.FPISsPQNL..QQSS..P.....Q...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.00|      12|      15|     730|     742|       5
---------------------------------------------------------------------------
  730-  742 (18.02/ 9.79)	AAQGGNlNSLQHG
  747-  758 (20.98/ 7.61)	ALQQGN.TGLMQG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     350.12|     101|     109|    1064|    1169|       6
---------------------------------------------------------------------------
  991- 1046 (56.63/21.31)	.......................................IS.ASPL..LAEFT......SVDGN.QANMPTQVP.TKSNAAERPMDRLL...KALrTTQRESLNAAVSD......
 1064- 1169 (157.85/82.80)	NGSRTAVGEDLVamTKCRLQArnfIANDGSGASKKMKRDIS.AMPLN.VSSAG......SVDDSFKQTFSVDTPDLQSTATSRAKRRKIEVNHAL.LEEIEEINQGLIDTTLRVC
 1173- 1273 (135.63/61.76)	DESPAATSEGTV..IKCTYTA...VAVSPSLKSMLASAQTSpIMPLRlLVPAGypkcspVLLDKFLDE.QRNSDDLSSKAKS.....KFGVLLRG.LEEPMSLRE..IARTWDAC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      84.38|      20|      20|      55|      74|       8
---------------------------------------------------------------------------
   55-   74 (31.39/17.81)	KHLPASAPDGVNELQKIAVR
   77-   96 (27.87/14.86)	EKIYTAATNQSDYLRKISLK
  119-  137 (25.12/12.55)	NSTPGLPSEGSNQAQPSAI.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.57|      12|      20|     921|     932|       9
---------------------------------------------------------------------------
  921-  932 (21.53/11.04)	PSQVKTGTPLNS
  943-  954 (21.04/10.61)	PSVAPSPIPVDS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22703 with Med15 domain of Kingdom Viridiplantae
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