<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22699

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAAAAGVDPNALPAAGGDWRAQLQPEARSRIVNKIMETLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAPGNVQVIPNQNNSGVNQTSTMQNASVMPQNTMNNGLVQGTSQDIYAAQRQMAGRQQQQQSQQLIYHQQQMLMKQKLQQNSLMQPHIQQQQSLLQPTQTQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQLNSVQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSPQPNIPLQQQHQQLMGQQPNAQQNQLIGQQNGAMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSMPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLQEVSSSTSADSTAQTGHAGAGDWQEEIYQMIKSLKDQYFAELSELFNKISVKLQHVDSIIPPQKPSEQYDRMKSFKIMLERILQMLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSFLQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNEVKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSVNSPFVPSPSPSIAPSPITVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIAVNTPGISASPLLAEFTSVDGSQANMPTQAPTKSSAVERPLVRLLKALRTTQRESLNAAVSDIRSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDTSAMPLNVSSAGSFNDSFKQTFSVDTPDLQSTATSQAKWQKIEVNHALLEEIQEINQQLIDTELHVCEDDAESFAGTCEGAEGTVIKCTFTAVAVSPSLKSIFASAQMSPIMPLRLLVPASYPKCSPVLLDKFPDEQRNSEDLSMKAKSKFSILLRGLAEPMSLREIARTWDACARKTIAEYAQKTGGGSFSSSYGCWESCVGA
Length1265
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.737
Instability index70.46
Isoelectric point9.20
Molecular weight139631.16
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22699
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.46|      18|      18|     410|     427|       1
---------------------------------------------------------------------------
  403-  422 (33.87/ 8.14)	QQPPMglMQPQSQHNQLQQS
  423-  440 (32.59/ 7.51)	QQHLM..SQFQSQPNQLQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     210.86|      37|      38|     862|     898|       6
---------------------------------------------------------------------------
  187-  222 (39.77/ 8.55)	LM..........................QPHIQQ...QQSLlqP........................T.....QTQsSQQSMMQMSS.GLHPG.Q
  223-  285 (35.90/ 6.88)	STV...PQT...................QPMAMQsatQSGI..QqnqlnsvqqsvqsllqqpqqsvgrQ.....QQQ.AQPSMHQQPS..LQSP.Q
  286-  331 (41.14/ 9.15)	PNIplqQQH...................QQLMGQ...QPNA..Q........................QnqligQQN.GAMEMQQQQRlPVQSN.N
  600-  652 (39.62/ 8.49)	PQI...QQHfqppagqapnssisqqqqpSQTLQQ...HD.............................S.....HTN.PQASLSSMST.GLQSS.S
  864-  901 (54.43/14.89)	PQI...SHH...................SPQVDQ...HNPL..P........................S.....QVK.TGTPLHSVNS.PFVPSpS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.40|      15|      15|     775|     789|       7
---------------------------------------------------------------------------
  775-  789 (30.59/13.15)	QQYQQKQQMLQQQLP
  791-  805 (27.81/11.13)	QQHLQKQQPVQMQIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.01|      15|      15|     706|     720|       8
---------------------------------------------------------------------------
  127-  140 (25.41/ 8.03)	MQNASVMP.QNTMNN
  706-  720 (26.50/ 8.70)	LQQGSTVPMQGTMNT
  722-  736 (25.10/ 7.83)	LQTSSSMLSHNSMST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.87|      19|      20|     666|     684|       9
---------------------------------------------------------------------------
  654-  675 (29.29/14.67)	AGIQHvpaPPTKNFSAPTQQNG
  676-  694 (32.58/17.30)	ANIQH...QADSNLETAQGGNF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.34|      18|      22|      67|      84|      11
---------------------------------------------------------------------------
   67-   84 (29.63/25.31)	LQKIAVR...FEEKIYTAATN
   89-  109 (25.71/20.73)	LRKISLKmlsMETKTQQAPGN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     110.13|      36|      80|     466|     515|      12
---------------------------------------------------------------------------
  466-  513 (49.09/49.46)	DQQKQFIQAHRGLQEVSSSTSADSTAqtghagagdwqeEIYQMIKSLK
  519-  554 (61.05/29.08)	ELSELFNKISVKLQHVDSIIPPQKPS............EQYDRMKSFK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.12|      45|      46|     951|     996|      13
---------------------------------------------------------------------------
  951-  996 (70.56/39.21)	SASPLLAEFTSVDGSQANMPTQAPTKSS..AVERPLVRLLKAlRTTQR
  998- 1044 (62.56/30.81)	SLNAAVSDIRSVVSMIDRIAGSAPGNGSraAVGEDLVAMTKC.RLQAR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22699 with Med15 domain of Kingdom Viridiplantae
Unable to open file!