<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22697

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAAAAGVDPNALPAAGGDWRAQLQPEARSRIVNKIMETLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAPGNVQVIPNQNNSAHGLPPQGSNQAQTSVIPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLVQGTSQDIYAAQRQMAGRQQQQQSQQLIYHQQQMLMKQKLQQNSLMQPHIQQQQSLLQPTQTQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQLNSVQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSPQPNIPLQQQHQQLMGQQPNAQQNQLIGQQNGAMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSMPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLQEVSSSTSADSTAQTGHAGAGDWQEEIYQMIKSLKDQYFAELSELFNKISVKLQHVDSIIPPQKPSEQYDRMKSFKIMLERILQMLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSFLQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNEVKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSVNSPFVPSPSPSIAPSPITVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIAVNTPGISASPLLAEFTSVDGSQANMPTQAPTKSSAVERPLVRLLKARESLNAAVSDIRSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDTSAMPLNVSSAGSFNDSFKQTFSVDTPDLQSTATSQAKWQKIEVNHALLEEIQEINQQLIDTELHVCEDDAESFAGTCEGAEGTVIKCTFTAVAVSPSLKSIFASAQMSPIMPLRLLVPASYPKCSPVLLDKFPDEQRNSEDLSMKAKSKFSILLRGLAEPMSLREIARTWDACARKTIAEYAQKTGGGSFSSSYGCWESCVGA
Length1307
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.730
Instability index70.50
Isoelectric point9.20
Molecular weight143853.73
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22697
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     675.00|     103|     104|     141|     243|       3
---------------------------------------------------------------------------
  163-  268 (175.90/45.84)	QNLPG.VNQTSTMQ........NASV...MPQ...NTMNNG..LVQGT...................S....QDIYAAQRQM..AGRQQQQQS...................QQLIYHQ..QQMLMK....Q..............K......LQQ..NSLM..QPHIQQ..QQ........sllQPTQTQSSQQSMMQMSSGLHPG
  269-  383 (82.29/16.70)	QST...VPQTQPMA................MQ...SATQSG..I....qqnqlnsvqqsvqsllqqpQ....QSV..........GRQQQQAQ...................PSM..HQ..QPSL......Q..............SpqpnipLQQqhQQLMgqQPNAQQ..NQligqqngamemQQQQRLP.....VQSNNLLNVQ
  384-  455 (106.38/24.20)	QTQQM.LNQTS..................MP............LHQ.....................P....QQL.GSQSNM..SSLQQQQQN...................QQ....P..QQLLGTvpnvS..............N......MQR..MHML..QTKVQQ...............QQHAQQPP............MG
  478-  591 (61.85/10.34)	QSQPNqLQQQLGMQ........QSS....MQQ...RLQTSGgmLLQQN...................N....MD...QQKQFiqAHRGLQEVSsstsadstaqtghagagdwQEEIYQM..IKSLKD....QyfaelselfnkisvK......LQH.vDSII..PPQ...........................KPS..........
  592-  670 (84.48/17.38)	.......EQYDRMK........SFKI...MLE...RILQ....MLQIS...................K....STI.....QP..AMRDKVPQ.........................YE..KQIISI....L..............N......SQR..RKPV..QPQIQQ..H..........fqPPAGQAPNSSISQQQQ......
  671-  773 (85.33/17.65)	...P...SQTLQQH........DSHT...NPQaslSSMSTG..L.QSS...................SaagiQHVPAPPTKN..FSAPTQQNG...................AN.IQHQadSNLETA....Q..............G......GNF..NSLQ..HGSVSSalQQ..........gSTVPMQGTMNTQLQTSS.....
  774-  853 (78.76/15.60)	.SMLS.HNSMSTMQpngnsmqaNASSflqLKQ...QQQDHQ..MMQ.....................S....QQM...KRQM....FQQYQQK...................QQML..Q..QQLPVQ....Q..............H......LQK..QQPV..QMQIPQ.....................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     116.09|      23|      33|     973|     995|       4
---------------------------------------------------------------------------
  905-  942 (21.38/ 6.39)	NLQASSPQIShhspQVDQ..HNPLpsqvktgtplhSVNSP
  973-  995 (39.43/19.30)	TGQAGHQQTS....LVPQ..TQSI...........AVNTP
 1007- 1030 (26.71/10.21)	TSVDG.SQAN....MPTQapTKSS...........AVERP
 1041- 1063 (28.57/11.54)	LNAAVSDIRS....VVSM..IDRI...........AGSAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.27|      18|     312|     854|     872|       5
---------------------------------------------------------------------------
  854-  871 (30.26/20.30)	LHAGNDVN..EVKVRQGTAM
  878-  897 (27.00/11.84)	QHLGQRSNyyHQQLKQSGAF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.41|      10|      19|     125|     134|       6
---------------------------------------------------------------------------
  125-  134 (18.33/ 8.06)	PQGSNQAQTS
  147-  156 (17.08/ 6.91)	PNSSTSVQAS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22697 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KQKLQQNSLMQPHIQQQQSLLQPTQTQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQ
2) MDANWRPTQGSDPAAAAAGVDPNALPAAGGDWRAQLQPEA
3) PLLAEFTSVDGSQANMPTQAPTKSSAVERPLV
4) QRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSFLQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNEVKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSVNSPFVPSPSPSIAPSPITVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIA
5) TQQAPGNVQVIPNQNNSAHGLPPQGSNQAQTSVIPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLVQGTSQDIYAAQRQMAG
6) VQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSPQPNIPLQQQHQQLMGQQPNAQQNQLIGQQNGAMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSMPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLQEVSSSTSADSTAQTGHAGA
226
1
1001
640
103
296
292
40
1032
991
206
545










Molecular Recognition Features






MoRF SequenceStartStop




NANANA