<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22694

Description Uncharacterized protein
SequenceMDANWRPTQGSDPAAAAAGVDPNALPAAGGDWRAQLQPEARSRIVNKIMETLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATNQSDYLRKISLKMLSMETKTQQAPGNVQVIPNQNNSAHGLPPQGSNQAQTSVIPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLVQGTSQDIYAAQRQMAGRQQQQQSQQLIYHQQQMLMKQKLQQNSLMQPHIQQQQSLLQPTQTQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQLNSVQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSPQPNIPLQQQHQQLMGQQPNAQQNQLIGQQNGAMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSMPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLQEVSSSTSADSTAQTGHAGAGDWQEEIYQMIKSLKDQYFAELSELFNKISVKLQHVDSIIPPQKPSEQYDRMKSFKIMLERILQMLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSFLQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNEVKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSVNSPFVPSPSPSIAPSPITVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIAVNTPGISASPLLAEFTSVDGSQANMPTQAPTKSSAVERPLVRLLKALRTTQRESLNAAVSDIRSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDTSAMPLNVSSAGSFNDSFKQTFSVDTPDLQSTATSQAKWQKIEVNHALLEEIQEINQQLIDTELHVCEDDAESFAGTCEGAEGTVIKCTFTAVAVSPSLKSIFASAQMLP
Length1218
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.767
Instability index70.15
Isoelectric point9.30
Molecular weight134135.62
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22694
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.51|      19|      21|     307|     326|       6
---------------------------------------------------------------------------
  307-  326 (33.21/11.69)	PQQSVGRQQQQaQPSMHQQP
  331-  349 (34.29/ 9.37)	PQPNIPLQQQH.QQLMGQQP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     182.85|      37|      38|     909|     945|      11
---------------------------------------------------------------------------
  672-  697 (30.39/ 7.30)	.........SQ......TLQ..Q...HD...SHTNPQASLSSMSTGLQS
  909-  945 (67.61/26.39)	S.SPQISHHSP......QVD..Q...HNPLPSQVKTGTPLHSVNSPFVP
  946-  985 (47.48/16.07)	SpSPSIAPSPI......TVD..SdkpHSNISSLTNTGQAGHQQTS.LVP
  993- 1032 (37.36/10.88)	N.TPGIS.ASPllaeftSVDgsQ...AN.MPTQAPTKSS..AVERPLV.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.19|      20|      20|     486|     505|      13
---------------------------------------------------------------------------
  486-  501 (21.63/ 8.11)	......QQLGMQQSSMQQRLQT
  502-  521 (25.97/11.77)	SGGMllQQNNMDQ..QKQFIQA
  522-  540 (26.59/12.29)	HRGL..QEVS.SSTSADSTAQT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     149.93|      32|      84|     274|     305|      14
---------------------------------------------------------------------------
  129-  158 (34.97/ 7.38)	NQAQTSViPLMSQQQ...ARQ.PNSSTSVQASSL
  159-  185 (39.39/ 9.39)	ANIGQNL.PG.VNQTSTM..Q.NA..SVMPQNTM
  269-  293 (36.77/ 8.20)	........QSTVPQTQPMAMQ.SATQSGIQQNQL
  831-  860 (38.80/ 9.12)	LQQQLPV.QQHLQKQQPVQMQiPQLHAG...NDV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.49|      31|     230|     864|     907|      17
---------------------------------------------------------------------------
  384-  440 (35.19/12.48)	QT...........QQMLNQTSmplhqpqqlgsqsnmsslqqqqqNQQPQQL..LGTVPnVSNMQrmHMLQ
  864-  907 (47.30/45.87)	KVrqgtamkpgmyQQHLGQRS.......................NYYHQQLkqSGAFP.ISSPQ..NNLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     103.40|      28|      30|    1069|    1097|      18
---------------------------------------------------------------------------
 1048- 1073 (31.92/19.91)	AAVSDirSVVSMID.RIAG....SAPGNGSR
 1074- 1102 (43.18/35.11)	AAVGE..DLVAMTKCRLQARNFiTNDGSGAS
 1103- 1124 (28.30/16.72)	KKMKR..DTSAMPLNVSSAGSF..ND.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.35|      27|      30|     561|     587|      19
---------------------------------------------------------------------------
  561-  587 (46.04/29.71)	DQY..FAELSELFNKISVKLQHVDSIIPP
  592-  620 (41.31/25.87)	EQYdrMKSFKIMLERILQMLQISKSTIQP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22694 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KQKLQQNSLMQPHIQQQQSLLQPTQTQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQ
2) MDANWRPTQGSDPAAAAAGVDPNALPAAGGDWRAQLQPEA
3) PLLAEFTSVDGSQANMPTQAPTKSSAVERPLVRL
4) QRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSFLQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNEVKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSVNSPFVPSPSPSIAPSPITVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIA
5) TQQAPGNVQVIPNQNNSAHGLPPQGSNQAQTSVIPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLVQGTSQDIYAAQRQMAG
6) VQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSPQPNIPLQQQHQQLMGQQPNAQQNQLIGQQNGAMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSMPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLQEVSSSTSADSTAQTGHAGA
226
1
1001
640
103
296
292
40
1034
991
206
545










Molecular Recognition Features






MoRF SequenceStartStop




NANANA