<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22692

Description Uncharacterized protein
SequenceMLSMETKTQQAPGNVQVIPNQNNSAHGLPPQGSNQAQTSVIPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLVQGTSQDIYAAQRQMAGRQQQQQSQQLIYHQQQMLMKQKLQQNSLMQPHIQQQQSLLQPTQTQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQLNSVQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSPQPNIPLQQQHQQLMGQQPNAQQNQLIGQQNGAMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSMPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLQEVSSSTSADSTAQTGHAGAGDWQEEIYQMIKSLKDQYFAELSELFNKISVKLQHVDSIIPPQKPSEQYDRMKSFKIMLERILQMLQISKSTIQPAMRDKVPQYEKQIISILNSQRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSFLQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNEVKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSVNSPFVPSPSPSIAPSPITVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIAVNTPGISASPLLAEFTSVDGSQANMPTQAPTKSSAVERPLVRLLKALRTTQRESLNAAVSDIRSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFITNDGSGASKKMKRDTSAMPLNVSSAGSFNDSFKQTFSVDTPDLQSTATSQAKWQKIEVNHALLEEIQEINQQLIDTELHVCEDDAESFAGTCEGAEGTVIKCTFTAVAVSPSLKSIFASAQMPNYAVEVACSC
Length1132
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.03
Grand average of hydropathy-0.778
Instability index72.66
Isoelectric point9.12
Molecular weight124654.90
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22692
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     933.94|     174|     201|      28|     228|       3
---------------------------------------------------------------------------
    3-  203 (254.51/56.71)	...............SMETKTQ..QAPGNVQvipnqnnsahgLPPQG.SN....QAQ.TSVIPLMSQQQ.....ARQPNSSTSVQASSLANIGQ..................NL.PGVNQTSTMQNASVMPQNtmnngLVQgtSQDIYAAQRQMAGRQQQQQSQQLIYHQQQMLMK....Q...KLQQNSLMQPHIQQQ...............................QSLlqptqtqssqqsmmqmssglHPGQS....TVPQTQPM...............AMQSATQSG...IQQNQLNSVQQ
  204-  406 (203.46/39.02)	SVQSLLQQ....PQQSVGRQQQ..QAQPSMH......qqpslQSPQP.N............IPL..QQQhqqlmGQQPN...A.QQNQL..IGQqngamemqqqqrlpvqsnNL.LNVQQTQQMLNQTSMP.......LHQ..PQQL.GSQSNMSSLQQQQQNQQ....PQQLLGTvpnvS...NMQRMHMLQTKVQQQqhaqqppmglmqpqsqhnqlqqsqqhlmsqfQS.....................QPNQ......L.Q.QQL...............GMQ...QSS...MQQR....LQT
  407-  507 (134.84/23.01)	SGGMLLQQ......NNMDQQKQfiQAHRGL.............................................QEVSSSTS..ADSTAQTGH..................AG.AG............DWQE............EIY....QMIKSLKDQYFAEL.....SELFN....KisvKLQ.......HVD..................................SI..............................IPPQKP........................S...EQYDRMKSFKI
  508-  632 (175.65/32.53)	MLERILQM....LQIS....KS..TIQPAMR...................dkvpQYE.KQIISILNSQR......RKP.....VQ....PQIQQ..................HFqPPAGQA...PNSSI....................SQ.......QQQPSQTLQQHDSHTNPQ....A...SL...SSMSTGLQSS...............................SA......................AGIQ....HVPAPPTK...............NFSAPTQ.......QNGAN.IQH
  653-  813 (165.47/30.15)	SVSSALQQgstvPMQGTMNTQL..QTSSSML....shnsmstMQPNGnSM....QANaSSFLQLKQQQQ.....DHQ.............................................................MMQ..SQQM...KRQM..FQQYQQKQQML..QQQLPVQ....Q...HLQKQQPVQMQIPQL......................................................HAGNDvnevKVRQGTAMkpgmyqqhlgqrsnyYHQQLKQSGafpISSPQ.NNLQA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     105.86|      24|      26|     953|     976|       4
---------------------------------------------------------------------------
  887-  903 (19.91/10.93)	.......SLVPQTQSIAVN.......TPGIS
  906-  929 (19.04/10.05)	PLLAEFTSV....D...GSqanmptqAPTKS
  930-  950 (27.79/18.88)	SAVE..RPLVRLL.KALRT.......TQRES
  953-  976 (39.11/30.30)	AAVSDIRSVVSMIDRIAGS.......APGNG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.62|      28|      43|     815|     842|       5
---------------------------------------------------------------------------
  815-  842 (54.52/26.49)	SPQISHHSPQ.......VDQ...HNPLPSQVKTGTPLH
  846-  883 (40.10/17.45)	SPFVPSPSPSiapspitVDSdkpHSNISSLTNTGQAGH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22692 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KQKLQQNSLMQPHIQQQQSLLQPTQTQSSQQSMMQMSSGLHPGQSTVPQTQPMAMQSATQSGIQQNQ
2) MLSMETKTQQAPGNVQVIPNQNNSAHGLPPQGSNQAQTSVIPLMSQQQARQPNSSTSVQASSLANIGQNLPGVNQTSTMQNASVMPQNTMNNGLVQGTSQDIYAAQRQMAG
3) PLLAEFTSVDGSQANMPTQAPTKSSAVERPLVRL
4) QRRKPVQPQIQQHFQPPAGQAPNSSISQQQQPSQTLQQHDSHTNPQASLSSMSTGLQSSSAAGIQHVPAPPTKNFSAPTQQNGANIQHQADSNLETAQGGNFNSLQHGSVSSALQQGSTVPMQGTMNTQLQTSSSMLSHNSMSTMQPNGNSMQANASSFLQLKQQQQDHQMMQSQQMKRQMFQQYQQKQQMLQQQLPVQQHLQKQQPVQMQIPQLHAGNDVNEVKVRQGTAMKPGMYQQHLGQRSNYYHQQLKQSGAFPISSPQNNLQASSPQISHHSPQVDQHNPLPSQVKTGTPLHSVNSPFVPSPSPSIAPSPITVDSDKPHSNISSLTNTGQAGHQQTSLVPQTQSIA
5) VQQSVQSLLQQPQQSVGRQQQQAQPSMHQQPSLQSPQPNIPLQQQHQQLMGQQPNAQQNQLIGQQNGAMEMQQQQRLPVQSNNLLNVQQTQQMLNQTSMPLHQPQQLGSQSNMSSLQQQQQNQQPQQLLGTVPNVSNMQRMHMLQTKVQQQQHAQQPPMGLMQPQSQHNQLQQSQQHLMSQFQSQPNQLQQQLGMQQSSMQQRLQTSGGMLLQQNNMDQQKQFIQAHRGLQEVSSSTSADSTAQTGHAGA
131
1
906
545
201
197
111
939
896
450










Molecular Recognition Features






MoRF SequenceStartStop




NANANA