<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22690

Description Uncharacterized protein
SequenceMASPRRRGEETDTEGRADVDGDRGGGLRRDGAGDGGARREHGGHRGEREQEQQARAQVGPRQVRARREGPLPDPARPPAHHHVGNYLPVSQVRDDVTSAYREELEWQARNMLLPYKKMCAQRQVEAEAVLLESDDVPAAISEEIDKFNIGKLVLGSSSRSIFRRKLKGSKTATKISECIPSFCTAYVVSKGKLSFVRSATSDACETPKTISSSTVSSPSSKSLSSAPSEWDDRNGTAAVLFRQSSLSSQRDHALANINRSASRGATPSGSAGSEISYHADTTLKTNSHSITSVAQLSSSSSSGDSVYRSFRGDSFRDISDLQAAVSETATDLKHSHDQDDLKLQIESMKVKLRHLQNLHDVSQNEPVDSTQKLPNDLGIRRVEDGIKLREIDLTEEMVKRLVRQMEREEEQVAEREAQPKQSSSEQDSNGDHQNSSDLETGRKNTGRCLTEYNRYSWEHIQAATSSFSSDLVIGKGTYGTVYKAKFQHTVAAVKVLNSLEGFGTQQLQQELEVLGKIRHPHLLLLLGACPERGCVVYEYMENGSLDDALNHRRNGMPPLAWYDRIRVAWEVATAVAFLHSARPDPIIHRDLKPANILLDRNLSSKVGDVGLSTALLHHSGAGGGGGQQQSTMVRNTTPVGTFCYIDPEYQRTGAVSAKSDVYALGVVVLQLLTGRTSPLGLAHAVETALEEDGGDSFAEMLDATAGQWPPEEARELAALALRCAEMRRRDRPGLREHILPALERIKDIAARAARETKALLRTASSSAAPGHFLCPILQEIMEDPCVAADGYTYDRKAIETWVSMKDKSPMTNLRLPSKSLIPNHSLRSAIMEWSSKNR
Length838
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.597
Instability index53.31
Isoelectric point6.72
Molecular weight92036.83
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22690
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.79|      26|      28|     163|     190|       1
---------------------------------------------------------------------------
  131-  157 (27.64/16.50)	.LESDDVPAAISEE.IDKFNIGKLVlgSS
  165-  190 (43.59/35.11)	KLKGSKTATKISEC.IPSFCTAYVV..SK
  192-  216 (27.56/12.78)	KLSFVRSATS.DACeTPKTISSSTV..S.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     120.62|      35|      35|      21|      55|       2
---------------------------------------------------------------------------
   21-   55 (66.28/32.16)	GDRGGGLRRDGAGDGGARREHGGHRGE...............REQ.EQQAR
   59-  109 (54.34/25.11)	GPRQVRARREGPLPDPARPPAHHHVGNylpvsqvrddvtsayREElEWQAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.73|      25|      31|     435|     463|       3
---------------------------------------------------------------------------
  435-  463 (37.30/45.91)	SSDLETGRKNTGrclTEYnRYSWEHIQAA
  468-  492 (44.43/35.11)	SSDLVIGKGTYG...TVY.KAKFQHTVAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.06|      28|      28|     251|     278|       4
---------------------------------------------------------------------------
  251-  278 (48.12/27.68)	DHALANINRSASRGATPSGSAGSEIS.YH
  280-  308 (38.94/20.97)	DTTLKTNSHSITSVAQLSSSSSSGDSvYR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      58.69|      13|      42|     331|     343|       5
---------------------------------------------------------------------------
  331-  343 (22.03/12.01)	DLKHSHDQDDLKL
  351-  363 (18.38/ 8.91)	KLRHLQNLHDVSQ
  376-  388 (18.27/ 8.81)	DLGIRRVEDGIKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.14|      16|     601|     218|     234|       7
---------------------------------------------------------------------------
  218-  234 (26.69/18.95)	PsSKSLSSAPSEWDDRN
  822-  837 (31.45/17.94)	P.NHSLRSAIMEWSSKN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22690 with Med32 domain of Kingdom Viridiplantae
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