<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22688

Description Uncharacterized protein
SequenceMSMEIEEEDSGETAPEMEAPGVSTVAIAVSGSRSSRHALKWALDKFVPGGRVLFRILHVRPPITMVPTPMGNYLPVSQVRDDVTSAYREELEWQARNMLLPYKKMCAQRQVEAEAVLLESDDVPAAISEEIDKFNIGKLVLGSSSRSIFRRKLKGSKTATKISECIPSFCTAYVVSKGKLSFVRSATSDACETPKTISSSTVSSPSSKSLSSAPSAEWDDRNGTAAVLFRQSSLSSQRDHALANINRSASRGATPSGSAGSEISYHADTTLKTNSHSITSVAQLSSSSSSGDSVYRSFRGDSFRDISDLQAAVSETATDLKHSHDQDDLKLQIESMKVKLRHLQNLHDVSQNEPVDSTQKLPNDLGIRRVEDGIKLREIDLTEEMVKRLVRQMEREEEQVAEREAQPKQSSSEQDSNGDHQNSSDLETGRKNTGRCLTEYNRYSWEHIQAATSSFSSDLVIGKGTYGTVYKAKFQHTVAAVKVLNSLEGFGTQQLQQELEVLGKIRHPHLLLLLGACPERGCVVYEYMENGSLDDALNHRRNGMPPLAWYDRIRVAWEVATAVAFLHSARPDPIIHRDLKPANILLDRNLSSKVGDVGLSTALLHHSGAGGGGGQQQSTMVRNTTPVGTFCYIDPEYQRTGAVSAKSDVYALGVVVLQLLTGRTSPLGLAHAVETALEEDGGDSFAEMLDATAGQWPPEEARELAALALRCAEMRRRDRPGLREHILPALERIKDIAARAARETKALLRTASSSAAPGHFLCPILQEIMEDPCVAADGYTYDRKAIETWVSMKDKSPMTNLRLPSKSLIPNHSLRSAIMEWSSKNR
Length826
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.437
Instability index53.44
Isoelectric point6.32
Molecular weight90656.02
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22688
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     155.21|      31|      85|     120|     150|       1
---------------------------------------------------------------------------
   81-  113 (32.07/19.90)	.DDVTSAYREELE.WQARNML.L.PykkmCAQ..RQVEA
  120-  150 (49.02/34.83)	SDDVPAAISEEIDKFNIGKLV.L.G....SSS..RSIFR
  155-  188 (34.15/21.74)	GSKTATKISECIPSFCTAYVVsK.G....KLSfvRSATS
  207-  238 (39.96/26.85)	SKSLSSAPSAEWDDRNGTAAV.LfR....QSS..LSSQR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.80|      14|      51|     748|     761|       2
---------------------------------------------------------------------------
  748-  761 (25.26/14.33)	LRTASSSAAPGHFL
  801-  814 (25.54/14.57)	LRLPSKSLIPNHSL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22688 with Med32 domain of Kingdom Viridiplantae
Unable to open file!