<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22687

Description Uncharacterized protein
SequenceMFRVPFTRDNNAVAQLIRSCFTSFLGPLVNGRSCFVANRGVINLMGQSPGQSGCRLSISPGCLYMRSCGMFLDNNFVCEEIFKVVIERAHALANECGCDINGPSYLMSGRMSISCALSSVEQIASLAATMLCHAGGVKLIHLMYDQIVPTLLLSPGDRKRGSAGSLCSIFEGFALAFVLLLSGASIWGIGENPPVYTSVHPSKRQRIVGMHLEFISMVMEGNMDLGCGQATWRAYVLCFVGLLVDFVPAWIPQVPLKTLQKLASGLKKWHEHDLAHSLLERGGPEAISIVVEHML
Length295
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.08
Grand average of hydropathy0.351
Instability index45.26
Isoelectric point7.96
Molecular weight32081.32
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22687
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.36|      24|      33|      20|      43|       1
---------------------------------------------------------------------------
   20-   43 (45.05/21.32)	CFTSFLGPLVNGRSC..FVANRGVIN
   54-   79 (43.31/20.28)	CRLSISPGCLYMRSCgmFLDNNFVCE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.53|      22|      34|      86|     118|       2
---------------------------------------------------------------------------
   86-  107 (41.45/25.86)	IERAHALANECGCDINGPS..YLM
  120-  143 (33.08/13.96)	VEQIASLAATMLCHAGGVKliHLM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      83.81|      20|      35|     172|     191|       3
---------------------------------------------------------------------------
  172-  191 (34.20/19.70)	GFALAFV.LLLSGASIWGIGE
  209-  229 (31.99/18.01)	GMHLEFIsMVMEGNMDLGCGQ
  234-  250 (17.62/ 6.99)	AYVLCFVgLLVDFVPAW....
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22687 with Med33 domain of Kingdom Viridiplantae
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