<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22685

Description Uncharacterized protein
SequenceMSMEIEEEDSGETAPEMEAPGVSTVAIAVSGSRSSRHALKWALDKFVPGGRVLFRILHVRPPITMVPTPMGNYLPVSQVRDDVTSAYREELEWQARNMLLPYKKMCAQRQVEAEAVLLESDDVPAAISEEIDKFNIGKLVLGSSSRSIFRRKLKGSKTATKISECIPSFCTAYVVSKGKLSFVRSATSDACETPKTISSSTVSSPSSKSLSSAPSEWDDRNGTAAVLFRQSSLSSQRDHALANINRSASRGATPSGSAGSEISYHADTTLKTNSHSITSVAQLSSSSSSGDSVYRSFRGDSFRDISDLQAAVSETATDLKHSHDQDDLKLQIESMKVKLRHLQNLHDVSQNEPVDSTQKLPNDLGIRRVEDGIKLREIDLTEEMVKRLVRQMEREEEQVAEREAQPKQSSSEQDSNGDHQNSSDLETGRKNTGRCLTEYNRYSWEHIQAATSSFSSDLVIGKGTYGTVYKAKFQHTVAAVKVLNSLEGFGTQQLQQELEVLGKIRHPHLLLLLGACPERGCVVYEYMENGSLDDALNHRRNGMPPLAWYDRIRVAWEVATAVAFLHSARPDPIIHRDLKPANILLDRNLSSKVGDVGLSTALLHHSGAGGGGGQQQSTMVRNTTPVGTFCYIDPEYQRTGAVSAKSDVYALGVVVLQLLTGRTSPLGLAHAVETALEEDGGDSFAEMLDATAGQWPPEEARELAALALRCAEMRRRDRPGLREHILPALERIKDIAARAARETKALLRTASSSAAPGHFLCPILQEIMEDPCVAADGYTYDRKAIETWVSMKDKSPMTNLRLPSKSLIPNHSLRSAIMEWSSKNR
Length825
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.440
Instability index53.73
Isoelectric point6.32
Molecular weight90584.94
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22685
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     210.86|      41|      51|     198|     238|       2
---------------------------------------------------------------------------
  113-  151 (46.26/25.96)	AEAVL..LE....SD.DVPAAISEEIDKFNIGKLVLGSSSRSIFRR
  163-  194 (20.05/ 6.67)	SECIPSFCTayvvSKgKLSFVRSATSDACETP..............
  198-  238 (66.55/40.90)	SSSTVSSPS....SK.SLSSAPSEWDDRNGTAAVLFRQSSLSSQRD
  247-  267 (30.65/14.48)	SASR..............GATPS......GSAG.....SEISYHAD
  284-  324 (47.35/26.77)	SSSSSSGDS...vYR.SFRG.DSFRDISDLQAAVSETATDLKHSHD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.80|      14|      51|     747|     760|       3
---------------------------------------------------------------------------
  747-  760 (25.26/16.06)	LRTASSSAAPGHFL
  800-  813 (25.54/16.33)	LRLPSKSLIPNHSL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22685 with Med32 domain of Kingdom Viridiplantae
Unable to open file!