<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22681

Description Uncharacterized protein
SequenceMDGGHGQRQPLSPAIPASAVLPHQRQMQLLQHPARPAIADLFTLYLGVNSKQRDEDPARETSNKLQKRVSAHNRDLPPRDEQFISDFEQLCVPFQDQEQLQAVTESVLISFVLQCSSHAPQSQFLLFATRCLCARGHLRWDSLIPSLLSVVSSAEAPMGQGGSVTVGGPVSSSSAIAVPNAPSFHASNPTSPLSAMNTIGSPTQSGIDQPVGANVSPMKAAEFSTLGQPGTTSRGDQSRRGAQVSYLHHLSCRIILAGLESNLKPATHAVIFHHMVNWLVNWDQRPHGVDEADTVQTSRIGRPVHEWMHLCLDVIWILVDEEKCRIPFYELVRSNLQFLENIPDDDAVICIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSHSQTSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGRIDFLDFVDKLASRVTNGDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFMNLDERAMGMFWVLSFTMAQPACDAVMTWFTSAGGAEFMQGPNMQPNERVTMMHETYPLSMVLLSGLSINLCLKLAYQLEETIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMVYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLTVRADKRGQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRRYLCAGAWMLMNGHPEINSANLARVLREFSPEEVTANIYTMVDVLLHHIQLELQRGHLVQDLLSKAITNLAFFVWTHELVPLDIVLLALIDRDDDPYALRLVISLLERPELQHRIKAFCSSRSPEHWLKNQPPKRAELQKALGNHLSWKDRYPPFFDDIAARLLPVIPLIIYRLIENDATDIADRVLAFYSTFLAFHPLRFTFVRDILAYFYGHLPSKLIVRILNVLGVSTKTPFSESFAQYLGSSNSSICPPPEYFANLLLGLVNNVIPPLSSKSKSNPADASGRRTNFSKPHASTQAGGNSNADAQRAFYQNQDPGSYTQLVLETAAIEILSLSVPASQIVSSLVQLIAHVQAMLIQSNTGQGMSGGLGQNSGLPTSPSGAGAESAGASRGNTSASGISANFVSRSGYSCQQLSVLMIQACGFLLAQLPPEFHMQLYSEAARIIKDCRWLSDSSRPVKELNSAVGYALLDPTWASQDSTSTAIGNIVALLHSFFSNLPQEWLESSHTVIKHLRPVTSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPHVPASEIGDIIDFVHHAVMYEGQGGPVQSTSKPKVEILTLCGKLLDLLRPDVQHLLSHLKTDPTSSIYAATHPKLAQQHPS
Length1613
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.08
Grand average of hydropathy-0.085
Instability index45.95
Isoelectric point7.36
Molecular weight180294.24
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IBA:GO_Central
transcription regulator complex	GO:0005667	IBA:GO_Central

GO - Biological Function
GO - Biological Process
positive regulation of gene expression	GO:0010628	IBA:GO_Central
regulation of transcription by RNA polymerase II	GO:0006357	IBA:GO_Central









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22681
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.93|      16|      23|     430|     445|       1
---------------------------------------------------------------------------
  430-  445 (32.24/19.75)	WERAL...RCLR.HALRTTP
  450-  469 (24.69/13.36)	WRRVLlvaPCYRsHSQTSTP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     130.73|      43|     183|     836|     909|       2
---------------------------------------------------------------------------
  511-  553 (74.09/45.65)	FFLMKS...GRIDFLDFVDK...LASRVTNGDQQILRSNHVTWL...LAQII
  841-  892 (56.63/95.42)	FFLVKKelkGPTEFTETLNRitiISLAITIKTRGIAEVEHMVYLqplLEQIM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.28|      14|      18|     169|     182|       3
---------------------------------------------------------------------------
  169-  182 (24.27/14.69)	PVSSSSAIAVPNAP
  189-  202 (26.00/16.33)	PTSPLSAMNTIGSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      93.95|      21|      22|    1416|    1436|       4
---------------------------------------------------------------------------
 1416- 1436 (36.65/23.78)	WLSDSSRPVKELNSAVG..YALL
 1440- 1457 (22.05/11.09)	WASQDS.....TSTAIGniVALL
 1468- 1488 (35.25/22.57)	WLESSHTVIKHLRPVTS..VAML
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.46|      13|      23|     345|     357|       6
---------------------------------------------------------------------------
  345-  357 (23.57/16.02)	DDAVICIIMEIHR
  370-  382 (26.90/19.45)	DQHLHCPTFGTHR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.70|      15|      15|    1192|    1206|       7
---------------------------------------------------------------------------
 1192- 1206 (27.11/16.00)	LGVSTKT..PFSESFAQ
 1208- 1224 (24.58/13.74)	LGSSNSSicPPPEYFAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     110.21|      31|      42|     633|     666|       9
---------------------------------------------------------------------------
  633-  666 (55.16/37.62)	WWkqmTKASGERMIDFMNL..DERAMGMFWVLSFTM
  677-  709 (55.05/30.28)	WF...TSAGGAEFMQGPNMqpNERVTMMHETYPLSM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.83|      14|     182|    1388|    1401|      10
---------------------------------------------------------------------------
 1388- 1401 (29.32/18.09)	CGFLLAQLPPEF.HM
 1573- 1587 (22.51/12.00)	CGKLLDLLRPDVqHL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.39|      29|      42|      82|     112|      11
---------------------------------------------------------------------------
   82-  112 (40.84/32.93)	QFISdFEQLCVPFQDQEQLQAVTESvLISFV
  123-  151 (51.55/31.69)	QFLL.FATRCLCARGHLRWDSLIPS.LLSVV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.54|      13|      18|       7|      21|      12
---------------------------------------------------------------------------
    7-   19 (25.02/17.92)	QRQPLS.PAIPASA
   26-   39 (20.52/ 6.26)	QMQLLQhPARPAIA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.92|      14|      19|    1145|    1163|      15
---------------------------------------------------------------------------
 1145- 1159 (18.52/ 8.16)	TDIADrVLAFYSTFL
 1167- 1180 (25.40/15.83)	TFVRD.ILAYFYGHL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.60|      14|      45|     975|     988|      16
---------------------------------------------------------------------------
  975-  988 (25.69/15.80)	LMNGHPEINSANLA
  991- 1004 (21.91/12.31)	LREFSPEEVTANIY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      80.78|      18|     349|     585|     603|      21
---------------------------------------------------------------------------
   56-   75 (23.02/ 8.33)	DPAR.ETSNKLqkrVSAHNRD
  565-  582 (30.89/15.16)	DPRKVETTRKI...ISFHKED
  586-  603 (26.87/17.00)	DPNNISPQSIL...LDFISSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.56|      16|      23|    1492|    1507|      23
---------------------------------------------------------------------------
 1492- 1507 (29.00/17.38)	FRILGPLLPRLAFARP
 1517- 1532 (28.57/17.01)	FNVLGDVFGKNSQASP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.15|      14|      16|    1043|    1057|      26
---------------------------------------------------------------------------
 1043- 1057 (17.49/13.71)	ELVPLDIVlLALIDR
 1060- 1073 (22.66/13.02)	DPYALRLV.ISLLER
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22681 with Med23 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KSKSNPADASGRRTNFSKPHASTQAGGNSNADAQRAFY
1240
1277










Molecular Recognition Features






MoRF SequenceStartStop




1) LFTLYLGV
41
48