<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22680

Description Uncharacterized protein
SequenceMEAHRRWDTSGSGSRYSFRTSVSSLADFGGEIVEAEARRAAVDRVFVAVPGEVKHGRSALQWALHNLAKDGAQVVVAHVHRPAQMIPMMGAKMHYTRLDPEQVKDYRKQELEKALERLEEYVVLCTMLKVSCEKIIIEKDDVAKGLEELIALHGITKLVMGAAADKHYSKKMKRPKSKTALGLMEAEASPCKIWFTCKGQLICTREANTTIPMIPPSPASTVASTLSASSISSRMRSITIHHSESEAPSSNGSPQQNLNRSRTEVMRHHSRGAGGTPPQLFEPLELNANARPTRTPLSSMDSWDEFGRRSQSSWYNLSRNDDAISVSESATHHPMHESDDDHFSSPFHELENPGADAEMYGRLEEALRETQESKKEVFEESTKRRKAELDLLSALQKAKELEKLYHHEIRQRKTIEETLVRQAQELEATKIQCDTIYDQLHDAEEQKAVLEQRMTEMESALRDGEEKLATSKCLLEALQADKEKLQQERDAAATAAAELRQKSEQRISMATEALNTEFSAVELEQATRSFDEVLKIGEGGFGCVYKGSLRSTTVAIKLLHPKSLQGQSEFNQEVAVLGRVRHPNLVALIGSCREAFGLVYEYLPNGSLEDRLACANDTPPLTWQVRTRIIYEMCSALTFLHSNKPHPVVHGDLKPANILLDANLVSKLGDFGICRLLTQSGTSTAATTLYRTTTPRGTFAYMDPEFLSSGELTPRSDVYSLGIIILQLLTGRRPQKIAEVVEDAVEKGELHTVLDPSAGAWPFVQANQLAHLGLRCAEMSRRRRPDLAREVWTVVEPLMKAASLTARRPTFAASSALPDEASTPSYFVCPIFQEMMNDPHIAADGFTYEAEAIRGWLDSGHDTSPMTNLKLAHRELTPNRGLRSVILEWQQQHRQYHEDWR
Length901
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.487
Instability index50.29
Isoelectric point6.14
Molecular weight100777.97
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22680
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     167.96|      43|      48|     426|     470|       1
---------------------------------------------------------------------------
  341-  374 (43.87/21.65)	...........D..........HFSSPFHELENPGAD..............AEM.YGRLEEALRETQE..SK
  379-  425 (36.77/16.53)	EESTkrrKAELD...........LLSALQKAKELEKL..........yhheIRQRKTIEETLVRQAQE....
  427-  470 (58.27/36.12)	.EAT...KIQCD..........TIYDQLHDAEEQKAV..............LEQRMTEMESALRDGEEklAT
  475-  538 (29.05/11.52)	LEAL...QADKEklqqerdaaaTAAAELRQKSEQRISmatealntefsaveLEQATRSFDEVLKIGE.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.16|      46|      50|     663|     712|       2
---------------------------------------------------------------------------
  645-  703 (67.59/54.15)	PHPVVHGDLkpanilldanlvSKLGDFGIC..RLLTQSGTSTAATTLyRTTTPRGTF.AYMD
  704-  755 (60.57/38.75)	PEFLSSGEL.........tprSDVYSLGIIilQLLTGRRPQKIAEVV.EDAVEKGELhTVLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.32|      24|     249|      57|      82|       5
---------------------------------------------------------------------------
   57-   82 (39.16/26.17)	RSALQWalHNLAK..DGAQVVVAHVHRP
  309-  334 (39.16/20.78)	RSQSSW..YNLSRndDAISVSESATHHP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22680 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LSRNDDAISVSESATHHPMHESDDDHFSSPFHELENPGADAEMYGRLEEALRETQESKKEVFEEST
2) SRMRSITIHHSESEAPSSNGSPQQNLNRSRTEVMRHHSRGAGGTPPQLFEPLELNANARPTRTPLSSMDSW
317
233
382
303










Molecular Recognition Features






MoRF SequenceStartStop




NANANA