<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22673

Description Uncharacterized protein
SequenceMAAEGDEEGAAAPKVVGLALSGSKSSAHVLRWALGNFAHDDAPPAAFKLIHVLTPVLAVPTPMGHLLPIDEVSTSVAEGELEKMWIQKQEMLQRCKDACDENKVEAQVLLVEGKDVADTISSLVSQYQIHSLVVGNPPSKSPFTRRSSASRTACKICKSLPSFCTAYVVSKDGLSSVHVPESESGSPSGSPVPTGNSGSSSTKEVTDGTSSRSDLDGSSAPGLPSFTLNDYLTGNAPVYANKDRRIASRTGAESSILSQLRGSDKVPTSSLQELMLSDNKDDVSTGLEKLNLEPSHNRLLATASKDADRESRLEKPLVLPSDSYSMFTWEEIDNATASFSLKIGTGSNGTVYKGHLNHLDVAIKVLHSDDKSSTKHFNQELEVLSKIRHPHLLMLLGACPDRGCLVYEYMENGSLADRLQRRKGTPPIPWFDRFRIAWEIGSALVFLHSTKPSPIIHRDLKPENVLLDRNLVSKIGDVGLSTLMPPKETLSNRTVYKKTGLAGTLFYLDPEYQRTGQVSVKSDTYALGMVILELLTARCPIGLPEVVERAVEDGQISDVLDESAGDWPVREAHDLAQLGLNCLEMRSKDRPDLNSVVLEELGRLKRIAASVSGVALPGSPSHFKCPILKTVMYDPCIASDGYTYERSAMEMWLCDKDVSPVTKARLRDKTLLPNLSLKSAIMRWVADGGRPVKE
Length694
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.275
Instability index43.87
Isoelectric point5.99
Molecular weight75437.96
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22673
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.73|      24|      62|     140|     199|       1
---------------------------------------------------------------------------
  140-  163 (43.30/58.89)	KSPFTRRSSASRTACKICKSLPSF
  203-  226 (41.43/ 6.76)	KEVTDGTSSRSDLDGSSAPGLPSF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     211.85|      68|     106|     260|     330|       2
---------------------------------------------------------------------------
  260-  330 (105.82/71.94)	LRGSDKVPTSSL.QEL.MLSDNKDdvSTGLEKLNLEPSHNRLLATASKD...ADRESRLEKPLVLP.SDSYSMfTWE
  366-  439 (106.03/62.24)	LHSDDKSSTKHFnQELeVLSKIRH..PHLLMLLGACPDRGCLVYEYMENgslADRLQRRKGTPPIPwFDRFRI.AWE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.04|      16|     148|     345|     360|       3
---------------------------------------------------------------------------
  345-  360 (32.76/24.78)	TGSNGTVYK.....GHLNHLD
  489-  509 (25.29/17.51)	TLSNRTVYKktglaGTLFYLD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22673 with Med32 domain of Kingdom Viridiplantae
Unable to open file!