<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22671

Description Uncharacterized protein
SequenceMDIKDKDLASEDSLWSLYERWCEQYRVARDLDDKTRRFNVFKQNARMIHKFNLFGGMTDEEVHRAYGRCSSIKSDGRKHRRQGRFTDDAINARKGLPSSVDWRKRPSAVTNVKLQGVHCGSCWAFAATAAVEGINSIRTRNQTSLSTQQLVDCDKGNGGCKGGFAKLAFKYIMQTGGIGTDAKYPYVGHEDGHCSAPKPNQNTVVTIDGYKQVAPNEMMALEQAVAAQPVVVGVDSNSTTFQRYGRGVFVGSCGTNLDHEMTVVGYGTTDKHETNNLCQFQVQGNQLDQLHAVASRFEAKVFSDSHNVQDYLRTISIKMMTLQSKWQPAASDHQAHTGGQVRPLNAVPAYATAVPPPQASPSTTTRLAVRPPQAQNMQLNHKPSQQPPMAPVAQLHPCDPTVAAQIQTQSLSRHHNSSGMCTRQPVAQAPFNHQPHMPPNAVTQIQTAVPRLTSANRLPPTDQVQNMGINPMAPTGQLHPCHPTAVTQIQSQSMARHNSSGMRAQEPQQDYLRVNQRQSYQAQGGQQSNVGPLQIGPSGERNNQQFGHHPVEVDWREDMFQRITSLKVAHFSELVEFQRAIQARIPQRITNQQLESLPKEQADKYRKLVDTMAKIGSALSFLQLQKSNIPEAMKDQFDKHQIRIDRILHFHRVMKDRLQNPPRAVNNIGATGSQQKHQEQPAAETSFSQSSENVPATSLLVQQQENSHDVAGEEAVHDEVRREAEAPVATNLTGSSTPPLTSGSGTCSQEKEDDHHPAYEAIPQLTQNANPVETPPAHQQTNRSLSPAALRSLAQDMGVNLKRAFRHTMSGSCAWFDESSGDSCNKRRKMHALRDEIRAAYSMLVETEIRITDDDTGGADGAVVIELCYIPVSLTPDLREVIDPSEMSTKLLVPADYPRSSPVHVGDDGGHRKGIAAGVLDVEFRRALGQLPEPRSIKGIAKAWDACVRRAVVQFAHGLGGGTFSTRYGRWESCIGA
Length977
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.638
Instability index49.73
Isoelectric point8.50
Molecular weight107816.64
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
cysteine-type peptidase activity	GO:0008234	IEA:UniProtKB-KW
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22671
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     225.69|      43|      43|     425|     467|       1
---------------------------------------------------------------------------
  366-  400 (52.19/24.43)	RL.....AV...R.PP..QAQ.NM....Q.....LNHKPsQQPPMApVAQLHP.CDP
  401-  450 (63.13/31.17)	TVAAqiqTQ...SLSRHHNSS.GMctrqPVAQAPFNHQP.HMPPNA.VTQIQT.AVP
  451-  495 (63.33/31.29)	RLTS...AN...RLPPTDQVQ.NM.ginPMAPTGQLHPC.H..PTA.VTQIQSqSMA
  496-  540 (47.03/21.25)	RHNS...SGmraQEPQQDYLRvNQ...rQSYQAQGGQQS.NVGP....LQIGP.SGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.33|      37|      43|     690|     730|       2
---------------------------------------------------------------------------
  690-  730 (44.38/47.25)	SSeNVPATS...LLVQQQENSHDVAgEEAVhDEVRREAEaPVAT
  735-  774 (61.94/41.24)	SS.TPPLTSgsgTCSQEKEDDHHPA.YEAI.PQLTQNAN.PVET
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.42|      20|     333|     222|     243|       4
---------------------------------------------------------------------------
  222-  243 (29.77/19.78)	EQAVAAQPvvVGVDSNSTTFQR
  543-  562 (40.65/21.90)	NQQFGHHP..VEVDWREDMFQR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.19|      31|      34|     599|     632|       8
---------------------------------------------------------------------------
  599-  632 (41.70/35.10)	KEQADKYRKLVDTMAKIGSALSfLQLQksNIPEA
  634-  664 (56.49/35.10)	KDQFDKHQIRIDRILHFHRVMK.DRLQ..NPPRA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.84|      10|      14|     191|     201|       9
---------------------------------------------------------------------------
  191-  201 (16.00/10.82)	DGHCSApKPNQ
  208-  217 (18.84/ 7.73)	DGYKQV.APNE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22671 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KWQPAASDHQAHTGGQVRPLNAVPAYATAVPPPQASPSTTTRLAVRPPQAQNMQLNHKPSQQPPMAPVAQLHPCDPTVAAQIQTQSLSRHHNSSGMCTRQPVAQAPFNHQPHMPPNAVTQIQTAVPRLTSANRLPPTDQVQNMGINPMAPTGQLHPCHPTAVTQIQSQSMARHNSSGMRAQEPQQDYLRVNQRQSYQAQGGQQSNVGPLQIGPSGERNNQQFGHHPVEV
2) LQNPPRAVNNIGATGSQQKHQEQPAAETSFSQSSENVPATSLLVQQQENSHDVAGEEAVHDEVRREAEAPVATNLTGSSTPPLTSGSGTCSQEKEDDHHPAYEAIPQLTQNANPVETPPAHQQTNRSLSPAALRS
325
658
553
792










Molecular Recognition Features






MoRF SequenceStartStop




NANANA