<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22668

Description Uncharacterized protein
SequenceMDGGHGQRQPLSPAISASAVLPHQRQMQLLQHPARPAIADLFTLYLGVNSKQRAEDPTRETSNKLQKRVSAHNRDLPPRDEQFISDFEQLCMPFPEQEQLQAVTESVLISFVLQCSSHAPQSQFLLFATRCLCARGHLRWDSLIPSLLTVVSSAEAPMGQGGSVTVGGPVSSSSAIAVPNAPSFHASNPTSPLSAMNTIGSPTQSGIDQPVGANVSPMKAAEFSTLGQPGTTSRGDQSRGGAQVSYLHHLSCRIILAGLESNLKPATHAVIFHHMVNWLVNWDQRPHGVDEADTVQTSRIGRPVHEWMHLCLDVIWILVDEEKCRIPFYELVRSNLQFLENIPDDDAVICIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPLHGEDLANSIPKGGFDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSHSQTSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNGDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFMNLDERAMGMFWVLSFTMAQPACDAVMTWFTSAGGAEFMQGPNMQPNERVTMMHETYPLSMALLSGLSINLCLKLAYQLEETIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMVYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLTVRADKRGQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRRYLCAGAWMLMNGHPEINSANLARVLREFSPEEVTANIYTMVDVLLHHIQLELQRGHLVQDLLSKAITNLAFFVWTHELVPLDIVLLALIDRDDDPYALRLVISLLERSELQHRIKAFCSSRSPEHWLKNQPPKRAELQKALGNHLSWKDRCFMNAAILPFSMTLLPACFQSSH
Length1139
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.08
Grand average of hydropathy-0.132
Instability index48.30
Isoelectric point6.93
Molecular weight129006.30
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22668
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.64|      13|      15|     382|     394|       1
---------------------------------------------------------------------------
  382-  394 (24.35/16.20)	RFLSQSYPSIAGE
  400-  412 (25.28/17.12)	RYSPITYPSVLGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     188.38|      47|     167|      10|      72|       2
---------------------------------------------------------------------------
   10-   59 (75.14/41.26)	PLSPAISASAVLPHQRQMQLLQHPARPAIADlftLYLGVN.SKQRAEDPTR
  179-  225 (71.92/32.41)	PNAPSFHASNPTSPLSAMNTIGSPTQSGI.D...QPVGANvSPMKAAEFST
  262-  290 (41.32/25.45)	NLKPA..THAVIFHHMVNWLVNWDQRPHGVD....................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     451.59|     123|     169|     763|     890|       3
---------------------------------------------------------------------------
  443-  551 (155.52/107.39)	...TTPSP.DWWRR....VLLVA.......PCYRSHSQTStpGAVFSPDMIGEAVADRT............IE..L..LKLtnSE.TQCWQDWLLFA......DifFFLMKS...GCIDFLDFVD.....K...LASRVTNGDQQILRSNHVTW...LLAQ
  585-  701 (104.79/68.66)	LDPNNISPqSILLDFISSSQTLRIWSFN..TSIREHLNSD..QLQ..........KGKQidewwkqmtkasGERMIdfMNL..DErAMGMFWVLSFTmaqpacD..AVMTWFTSAGGAEFMQGPNmqpneRVTMM..........................
  763-  890 (191.27/148.22)	TTLTQRSP.SILSKSGVSLLLLEILNYRllPLYRYHGKSK..ALMYDVTKIISMIKGKR............GEHRL..FRL..AE.NLCMNLILSLR......D..FFLVKKELKGPTEFTETLN.....RITIISLAITIKTRGIAEVEHMVYlqpLLEQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.04|      15|      15|     972|     986|       5
---------------------------------------------------------------------------
  972-  986 (29.61/15.71)	AWMLMNGHPEINSAN
  988- 1002 (25.43/12.60)	ARVLREFSPEEVTAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.99|      31|     712|     307|     337|       6
---------------------------------------------------------------------------
  307-  337 (60.08/44.94)	WMH..LCLDVIWI.LVDEEKC....RIPFYELVRSNLQ
 1040- 1077 (38.91/26.29)	WTHelVPLDIVLLaLIDRDDDpyalRLVISLLERSELQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22668 with Med23 domain of Kingdom Viridiplantae
Unable to open file!